Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02326 ATGTCTTCCTCAAATTTCTTCACAATTATTCTCATTTCACTAACCTTAGCTCTTATTCCCCAAACATCTTTTGCACTCAACGATCCTCTCTTCCACATATGTTCAACCTCTAAGAATTTCACACCTCACACCCCTTATGAATCAAACTTGAAAACACTCATCAACTCACTTATCTACAAAACCCCTTCAACGGGCTTTGGCATTGGATCAGTGGGCCAGGCCCAATACCAAAACCAACCAGCATATGGGCTTGCTCTTTGTCGTGGCGATATAACAACCTTAGAATGCAAAACTTGTGTTTCAAATGCAAGTAAAGAAATTCTAAATCTTTGTCCATACAATAAGGGTGCTATTATATGGTACGATAATTGCATGTTCAAGTATTCGGACATTGATTTCTTTGGCAAAATTGATAATACAAACAAATTCTCTTTATTAAATGTACAAAATGTTAGTGGAGATTCTATGAAATTCAACAACATGACTAAGGACTTATTGAGCTTACTTGCTTATGAAGCTTCTTTGGATAAAAAACTTTATGCTAGTGGAGAATTGAAGATTGGTGAATTAGAGAGAGTTTATGGGCTAAGTGAATGCACTAGAGACCTTACTAGTGTTGATTGTAAGAAGTGTCTTGATGATGCAATTAGTGAACTATCAAATTTTTCTGATGGAAAAAAAGGAGGCAGAGTTGTTGGTGGAAGTTGCAACGTTCAATATGAAATTTACCCTTTTGTTAGGGAGTAA 747 0.3588 MSSSNFFTIILISLTLALIPQTSFALNDPLFHICSTSKNFTPHTPYESNLKTLINSLIYKTPSTGFGIGSVGQAQYQNQPAYGLALCRGDITTLECKTCVSNASKEILNLCPYNKGAIIWYDNCMFKYSDIDFFGKIDNTNKFSLLNVQNVSGDSMKFNNMTKDLLSLLAYEASLDKKLYASGELKIGELERVYGLSECTRDLTSVDCKKCLDDAISELSNFSDGKKGGRVVGGSCNVQYEIYPFVRE 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02326 248 Gene3D - 139 245 IPR038408 -
Car01g02326 248 Gene3D - 27 133 IPR038408 -
Car01g02326 248 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Car01g02326 248 ProSiteProfiles Gnk2-homologous domain profile. 139 245 IPR002902 -
Car01g02326 248 PANTHER DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED 1 247 - -
Car01g02326 248 Pfam Salt stress response/antifungal 34 130 IPR002902 -
Car01g02326 248 Pfam Salt stress response/antifungal 154 242 IPR002902 -
Car01g02326 248 Coils Coil 248 248 - -
Car01g02326 248 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02326 Car-Chr1 49077509 49078428 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02326 3 247 Pollen Coat Proteome AT4G20670 38.735 5.20e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02326 - - gmx:100527155 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02326 01 49077509 49078428 Car01g02326 01 49077509 49078428 ECH