Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02325 ATGTGCAAAGGAACAGAACCAAAAGAACACAACTTCTTCCCAACAACTAAAGAGAGTGTTTCACCTCAAAAAACAAGAGATTCTAAATGTTGTGAGCTATGTGGTTTACAAGCTTCATTATATTGTCAAGCTGATGATGCATATTTATGTAGAAAATGTGACAAAAGGGTTCATGAGGCCAATTTTTTAGCCCTTAGACACATTAGGTGCTTTCTTTGCAACACATGTCAAAACCTTACGAGAAGATATCTTATTGGAGCCTCGGTAGAGGTGGTTCTTCCTGCCAACATAAGCTGGAACAAAGGAAACTTTCCTAATAATAGCTCCTTCATAAAGTGTTCAAGAACTCATAACAATATTACTTCCATCTTTCTTTAA 378 0.3624 MCKGTEPKEHNFFPTTKESVSPQKTRDSKCCELCGLQASLYCQADDAYLCRKCDKRVHEANFLALRHIRCFLCNTCQNLTRRYLIGASVEVVLPANISWNKGNFPNNSSFIKCSRTHNNITSIFL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02325 125 PANTHER B-BOX ZINC FINGER PROTEIN 29 18 98 - -
Car01g02325 125 CDD Bbox1_BBX-like 30 72 - -
Car01g02325 125 SMART bboxneu5 26 72 IPR000315 GO:0008270
Car01g02325 125 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 18 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02325 Car-Chr1 49074165 49075081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02325 31 108 C2C2-CO-like Transcription Factor Family AT3G21890 53.165 1.33e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02325 - - gmx:100500322 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02325 01 49074165 49075081 Car01g02325 01 49074165 49075081 ECH
Car01g02325 01 49074165 49075081 Car06g03228 06 59697008 59697785 PCT