LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car01g02285	ATGTCACTACCACCAGTGATATCACCGACGGCGAGGCCAACGGAGCTTCCAATCCGGCAAATTCCAGGAAGTTATGGATGGCCTTTGCTGGGTCCTTTGTCAGATAGATTGGACTATTTCTGGTTCCAGAAGCCAGATAATTTCTTCAAAACACGAATGGAGAAATACAAAAGTACCGTGTTCCGTACCAATATTCCTCCCTCATTCCCTTTCTTCATGAACGTGAACCCTAACATCATTGCTCTTCTCGATTGTAAATCTTTCTCTCACCTCTTCGACATGGATCTTGTCGATAAAAAGGATGTTCTGGTCGGAGATTTTGTCCCTAGTGTTGCTTTCACTGGGAATATTAGGGTTGGTGTTTATCAGGATGTTTCTGAACTTCAACATTCTAAGGTAAAGAAGTTCTCAATGAACATCTTGAAACAAAGCTCAAGCATATGGGTATCAGAACTAATATCAAACCTAGACATATTTTTGGACGAAATGGAAACAACATTGTCAAAAAATTCATCAGCAAGTTACTTGTTCCCACTGCAAAAATTCTTGTTCACTTTCCTTTTCAAAGTCCTTGCAAGAGCTGACCCTTCCCTTGACCCCAAAATTGCTGAATCAGGTTACTCTATGCTCAACCGTTGGCTTGCCCTTCAGCTTTTACCTACAGTTAGTGTCGGTACAATTCAACCACTTGAAGAAATTTTACTTCATTCCTTCTCTTACCCTTTCTTTCTTGTTAGTGGAGACTACAACAACCTCTACAACTTCGTTAAACAACATGGTAAGGAAGTGATAGGAAGTGGAATAGAATTTGGGTTGAGTGAAGATGAGGCCATCCACAACTTGCTTTTTATGTTGGGTTTCAACTCATTTGGTGGCTTTTCAGTTTTCCTTCCAAATTTATTAGACAACATAGCAAATGCCCCAAAGGATTTGCAACACAAGTTAAGAAAGGAAGCAAGAGAGAAGGGCGGTTCGACTCTTGGGTTTGACTCCTTGAAAGAAATGGAGCTAATTAATTCAACGGTTTACGAAACCCTTCGAATGAACCCACCGGTTCCGCTTCAATTCGGTCGAGCTAGAAAGGATTTTCGGCTCAATTCGTATGACTCGTCGTTCAATGTGAAGAAGGGTGAGTTATTATGTGGATATCAAAAGCTTGTAATGAGGGATTCAGTTGTGTTTGATGAACCAGACCGGTTTAAACCGGAACGGTTCACTGAAGAGAAAGGGGCCGAGTTATTGAACTATTTGTATTGGTCTAATGGACCACAAACTGGTTCGCCAAGTGTGTCTAATAAGCAATGTGCGGCCAAGGACATTGTAACCTTCACCGCATCATTGATTGTGGCACATTTGTTTCGTAGGTACGATTTCATTAAAGGGGATGGTAGTTCCTTCACTATCTTACGCAAGGCCACATGA	1422	0.4142	MSLPPVISPTARPTELPIRQIPGSYGWPLLGPLSDRLDYFWFQKPDNFFKTRMEKYKSTVFRTNIPPSFPFFMNVNPNIIALLDCKSFSHLFDMDLVDKKDVLVGDFVPSVAFTGNIRVGVYQDVSELQHSKVKKFSMNILKQSSSIWVSELISNLDIFLDEMETTLSKNSSASYLFPLQKFLFTFLFKVLARADPSLDPKIAESGYSMLNRWLALQLLPTVSVGTIQPLEEILLHSFSYPFFLVSGDYNNLYNFVKQHGKEVIGSGIEFGLSEDEAIHNLLFMLGFNSFGGFSVFLPNLLDNIANAPKDLQHKLRKEAREKGGSTLGFDSLKEMELINSTVYETLRMNPPVPLQFGRARKDFRLNSYDSSFNVKKGELLCGYQKLVMRDSVVFDEPDRFKPERFTEEKGAELLNYLYWSNGPQTGSPSVSNKQCAAKDIVTFTASLIVAHLFRRYDFIKGDGSSFTILRKAT	473

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car01g02285	473	PANTHER	CYTOCHROME P450 26	11	469	-	-
	Car01g02285	473	Pfam	Cytochrome P450	309	416	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Car01g02285	473	PANTHER	INACTIVE LINOLENATE HYDROPEROXIDE LYASE-RELATED	11	469	-	-
	Car01g02285	473	SUPERFAMILY	Cytochrome P450	17	464	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Car01g02285	473	Gene3D	Cytochrome P450	16	472	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Car01g02285	473	PRINTS	E-class P450 group IV signature	335	351	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Car01g02285	473	PRINTS	E-class P450 group IV signature	372	386	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Car01g02285	473	PRINTS	E-class P450 group IV signature	388	406	IPR002403	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Car01g02285	Car-Chr1	48613040	48617517	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car01g02285	94	472	Cytochrome P450	AT4G15440	59.008	2.09e-166	473

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car01g02285	K10528		-	gmx:100784395	745.732

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Car01g02285	01	48613040	48617517	Car01g02285	01	48613040	48617517	ECH