Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02275 ATGGATCCCTTGATCCGCAAGCTCCGGCGTCACCTTCTCCGTTGGCTTCACCGATCTCGTTCCGGTTCGGTACTTTTTGTGAGAAGAATTTCATACAAGGAGGTTAGAAAAGCAACCGATGGTTTTCAAAGAATCGTTTTTAGCAATTCTGAAATTTCTGCGTACGCTGCGAATTTTGGAGAGAGTGATGGTGGTGTTTGTTTGGTGAAAGAAGTTAAAGATTTTGATAGAGGAAATGATGATAATTTCCATAGACAAGTTCAGTTCCTGGGACGCTTGCATCATCGTCACCTTCTCTCACTCAAAGGCTTTTCTTTGAAACACAATCACAAGAGCAAGAGACTGCTCATATTTGACAACATAGAAAACGGAAGCTTAAAGGAGCATCTAAATGACCCCTTGAAGACTCCCTTAAATTGGAGGACAAGGTTGCAGATAGCTAATGGTGTTGTGGCTGCACTGGAATACTTATTTCTTTTCAGTGAACCACCAGTAACTCATGTCTCTATCAGCTCTGGCAATATTATGTTAGATGAGAACTTCACCGCTAAACTATCCGACTTTGGCCTTCAAACTGGTGGAAAATCTGTCACACAAGATTGCACTGGGCAGGAAAGTTGTAAGATTATATTCCAACTTGGAGTACTCATACTGGAACTTGTCACAGGTCAGTCTTCAGAGATGGAAGGTTCTGATTTAATTGAATGGATTCAAGAATCCAGATTTTTCAGTTCAATAGACAAAATGCTAGACCCTGATCTTGGAAACAGTTTTGACTGTACGGAGCTTAAAAGTCTTCTAGCTGTGGCAAAATTATGTATCAAATCATGGGACAAGCCTTCATATACAGTTCCTCAGTTATTTCGGTATCTCCAAAAGAAGATTAATATTCCCCAAGATTAG 903 0.4042 MDPLIRKLRRHLLRWLHRSRSGSVLFVRRISYKEVRKATDGFQRIVFSNSEISAYAANFGESDGGVCLVKEVKDFDRGNDDNFHRQVQFLGRLHHRHLLSLKGFSLKHNHKSKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALEYLFLFSEPPVTHVSISSGNIMLDENFTAKLSDFGLQTGGKSVTQDCTGQESCKIIFQLGVLILELVTGQSSEMEGSDLIEWIQESRFFSSIDKMLDPDLGNSFDCTELKSLLAVAKLCIKSWDKPSYTVPQLFRYLQKKINIPQD 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02275 300 Gene3D Transferase(Phosphotransferase) domain 1 210 299 - -
Car01g02275 300 Gene3D Phosphorylase Kinase; domain 1 17 119 - -
Car01g02275 300 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 296 - -
Car01g02275 300 PANTHER OS01G0253100 PROTEIN 1 296 IPR045271 GO:0004714|GO:0006468
Car01g02275 300 Gene3D Transferase(Phosphotransferase) domain 1 121 208 - -
Car01g02275 300 Pfam Protein tyrosine and serine/threonine kinase 63 194 IPR001245 GO:0004672|GO:0006468
Car01g02275 300 ProSiteProfiles Protein kinase domain profile. 32 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02275 300 SUPERFAMILY Protein kinase-like (PK-like) 58 266 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02275 Car-Chr1 48507712 48510837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02275 22 296 Receptor kinase-like Gene Family AT3G19300 34.868 4.56e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Car01g02275 PK_Tyr_Ser-Thr 6.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02275 - - aprc:113853565 452.981