Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02274 ATGTTTGGAAGAGCACCAACCAAAAGTGATAATACTAAGTATTATGAAATTCTCGGCGTTTCGAAAAGCGCTTCTCAGGATGATTTGAAGAAAGCTTACAAAAAAGCAGCTATTAAGAATCATCCTGACAAGGGTGGTGATCCTGAGAAGTTCAAAGAGCTTGCACAAGCGTATGAGGTTTTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTATGGTGAAGATGCACTTAAGGAAGGAATGGGTGGTGGTGGCGGTGGGCATGATCCATTTGATATCTTCAGTTCTTTCTTTGGTGGAGGTGGATTTTCAGGTGGAGGTGGTAGGGTAAGGAGGCAGAGACGTGGAGAAGATGTGGTTCACCCTTTGAAGGTTTCATTGGAGGATCTTTACCTTGGAACATCTAAGAAGCTTTCTCTTTCACGAAATGTCTTGTGCTCAAAGTGCAAAGGGAAAGGCTCAAAGTCCGGTGCTTCGATGACATGTGCTGGTtgtcaaggtactggtatgaaggtttctattaggcatttgggtgctagtatgattcagcaaatgcagcatccttgcaatgaatgcaagggtactggtgagacaatcagtgacaaagatcgatgcgggcagtgcaagggtgagaaggttgttcaagagaagaaagtacttgaagttattgtggagaaaggaatgcagaatggacagaagattacattccctggtgaagctgaTGAAGCGCCGGATACAATCACTGGGGATATTGTCTTTGTATTACAACAAAAGGAACATCCCAAGTTCAGAAGAAAGAGTGAAGATCTTTTTGTAGAGCACACATTGTCTCTCACCGAAGCTCTGTGTGGCTTCCAATTTGCGCTGACTCATTTGGATGGTCGGCAACTCTTGATTAAGTCGAACCCTGGAGAAGTTGTCAAGCCTGGTATATAA 939 0.3301 MFGRAPTKSDNTKYYEILGVSKSASQDDLKKAYKKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFSSFFGGGGFSGGGGRVRRQRRGEDVVHPLKVSLEDLYLGTSKKLSLSRNVLCSKCKGKGSKSGASMTCAGCQGTGMKVSIRHLGASMIQQMQHPCNECKGTGETISDKDRCGQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTITGDIVFVLQQKEHPKFRRKSEDLFVEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPGI 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02274 312 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Car01g02274 312 Pfam DnaJ domain 13 71 IPR001623 -
Car01g02274 312 CDD DnaJ 14 63 IPR001623 -
Car01g02274 312 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
Car01g02274 312 PRINTS DnaJ domain signature 46 66 IPR001623 -
Car01g02274 312 PRINTS DnaJ domain signature 15 33 IPR001623 -
Car01g02274 312 PRINTS DnaJ domain signature 66 85 IPR001623 -
Car01g02274 312 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Car01g02274 312 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 271 IPR008971 GO:0006457|GO:0051082
Car01g02274 312 Gene3D - 263 312 - -
Car01g02274 312 Gene3D - 147 213 - -
Car01g02274 312 Gene3D - 110 259 - -
Car01g02274 312 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Car01g02274 312 CDD DnaJ_C 118 309 - -
Car01g02274 312 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Car01g02274 312 Pfam DnaJ C terminal domain 121 308 IPR002939 -
Car01g02274 312 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Car01g02274 312 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 311 IPR008971 GO:0006457|GO:0051082
Car01g02274 312 SUPERFAMILY Chaperone J-domain 9 109 IPR036869 -
Car01g02274 312 SMART dnaj_3 12 66 IPR001623 -
Car01g02274 312 PANTHER CHAPERONE PROTEIN DNAJ 2-RELATED 6 310 - -
Car01g02274 312 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 6 310 IPR044713 GO:0006457|GO:0030544
Car01g02274 312 Gene3D DnaJ domain 10 109 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02274 Car-Chr1 48503872 48505724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02274 5 73 C2H2 Transcription Factor Family AT1G74250 39.744 2.23e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02274 K09503 - csv:101205422 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02274 01 48503872 48505724 Car01g02274 01 48503872 48505724 ECH
Car01g02274 01 48503872 48505724 Car06g03297 06 61719711 61723256 PCT