Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02271 ATGGATGTGGATTCCTCGATGGTACATGAAGCCGATCACGATCCTATCGTGCAGAATCAAACTACTGAATCTCCGGCGCCGGTTAAAGTAGAGGGAGCACAGCTTACCGAACCTCCCTCATCGTCCGGCGGCGGATCTCCGGCGGAGGGGCAGCAGCAGCAAGCGGCTAGTGAGGTGCAGCAGAGTCCGGTTGTCGGACCGAGGCTGGCGCCGAATTACACTGTGGTGAATGCAATTTTAGAAAAGAAGGAGGATGGACCGGGACCGAGGTGTGGTCACACGTTGACGGCGGTGGCGGCCGTCGGAGAGGAAGGGACGCCTGGGTACATTGGTCCGAGGCTGATTTTGTTTGGTGGTGCCACTGCACTTGAAGGAAATTCCGCGGCTTCTGGAACTCCTACATCAGCTGGAAATGCTGGCATACGTTTAGCTGGTGCCACGGCTGATGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTCGGCTAACTCCCTTTGGAGAACCTCCAACACCAAGGGCTGCCCATGTGGCCACTGCCGTGGGAACCATGGTGGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCGGCAGAAGACCTTCATGTTCTCGATCTCACTCAGCAATGGCCCCGATGGCATAGAGTGTCTGTTCAAGGCCCCGGACCAGGGTCACGCTATGGACATGTAATGGCTTTAGTTGGCCAGCGGTATCTTATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGACGTATGGGCCTTGGACACAGCTGCCAAGCCATATGAATGGCGCAAGTTAGAGCCAGAAGGAGAGGGTCCTCCTCCATGCATGTATGCAACTGCAAGTGCACGCTCTGACGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTTCCATTGGCCAGTGCATATGGACTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCAATTGCTCCAGGTGTCTCACCATCTCCAAGATATCAGCATGCAGCGGTGTTTGTTAATGCAAGGCTACATGTGTCTGGTGGGGCTCTTGGTGGAGGACGGATGGTTGAAGACTCATCAAGTGTTGCAGTATTGGACACTGCTGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCACTCCAAGAACTGGTAGATACAGTGCTGATGCAGCTGGTGGAGACGCTGCAGTTGAGTTGACTCGACGTTGCAGGCATGCTGCTGCTGCAGTTGGTGACCTGATTTTTATTTACGGTGGTTTACGTGGGGGAGTCTTGCTGGATGACCTACTTGTTGCTGAAGATCTAGCTGCTGCTGAAACAACAActgctgcttcacatgccgctgccgcagccgctgcATCTAATGTACAAGAAGGACGCATGCCTGGACGATATGGGTTTGATGATAGGCCAAGGCAAATAATGACTGAAGCAGCTGCTGATGGTTCTGTTGTATTGGGAAATCCAGTTGCACCACCAATGAATGGTGACATTTATACTGACATCAGCACTGAAAATGCCATGCTTCAGGGACCTCGTACAACTGCCAAAGGAGTGGAGTATCTGGTTGAAGCATCTGCCGCAGAAGCCGAAGCTATTAGTGCAGCACTGGCTGCTGCCAAGGCACGGCAAGAGAATGGAGAAGTGGAATTGCCCGACAGAGACCGTGGGGCTGAGGCTACCCCAAGTGGGAAACACACATCTTCCTTGATTAAGCCTGATTCTGTTGGGTCAAATAACAATGTTTCTGGTGGAGTTCGGCTGCATCACAGAGCTGTAGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAGCTTTCAATTGATCAATTTGAAAATGAAGGCAGGCGGGTCAGTTATGGGACTCCAGAAAATGCAACTGCTGCTAGAAAATTATTAGATCGGCAGATGTCCATCAATAGTGTGCCAAAAAAGGTCATAGCACACCTCTTAAAGCCTCGTGGATGGAAACCACCAGTACGCCGACAATTTTTCTTGGATTGCAATGAAATTGCTGATCTTTGTGATAGTGCTGAGCGGATATTTTCAAGTGAACCAAGTGTCTTACAACTCAGTGCACCAATTAAAATATTTGGTGATTTACATGGGCAGTTTGGAGATCTCATGCGGCTTTTTGATGAGTATGGGGCACCATCAACTGCTGGTGACATTGCATATATCGATTATCTATTCCTAGGAGATTATGTTGATCGGGGACAGCACAGCTTGGAAACTATAACCCTTCTTCTTTCTTTGAAGGTTGAGTATCCCAACAATGTACATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTTCGAATTGAGTGCATTGAAAGGATGGGTGAGAGAGACGGAATTTGGACGTGGCATCGGATTAACCGGCTGTTTAATTGGCTTCCTCTAGCTGCTTTAATTGAGAAAAAGATTATTTGCATGCATGGAGGTATTGGTCGTTCAATAAATCATGTGGAACAGATTGAAAATATTCAAAGACCAATTCCAATGGAAGCAGGGTCAATTGTTCTTATGGATCTGTTATGGTCTGATCCAACAGAGAATGACAGTGTAGAAGGACTGAGGCCAAATGCTAGAGGTCCTGGATTAGTTACTTTTGGGCCTGATCGAGTCATGGAATTTTGCAACAACAATGATCTTCAGCTAATTGTCCGAGCACATGAATGTGTGATGGATGGGTTTGAGCGATTTGCCCAAGGACATCTTATCACACTTTTCTCAGCTACAAACTATTGTGGTACTGCGAATAATGCTGGAGCAATATTAGTTTTGGGTAGAGACCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAACGTCCCCAGAACGGCATATTGAAGATACATGGATGCAGGAGTTGAATGCCAACAGACCACCAACACCAACTAGAGGCCGTCCCCAAGTTACAAATGACCGAGGTTCGCTCGCCTGGATATAG 3012 0.4751 MDVDSSMVHEADHDPIVQNQTTESPAPVKVEGAQLTEPPSSSGGGSPAEGQQQQAASEVQQSPVVGPRLAPNYTVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGNSAASGTPTSAGNAGIRLAGATADVHCYDVLTNKWSRLTPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQWPRWHRVSVQGPGPGSRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTTPRTGRYSADAAGGDAAVELTRRCRHAAAAVGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTTAASHAAAAAAASNVQEGRMPGRYGFDDRPRQIMTEAAADGSVVLGNPVAPPMNGDIYTDISTENAMLQGPRTTAKGVEYLVEASAAEAEAISAALAAAKARQENGEVELPDRDRGAEATPSGKHTSSLIKPDSVGSNNNVSGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLSAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLSLKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWTWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPIPMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNDRGSLAWI 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02271 1003 SUPERFAMILY Kelch motif 144 434 IPR015915 GO:0005515
Car01g02271 1003 ProSitePatterns Serine/threonine specific protein phosphatases signature. 769 774 IPR006186 GO:0016787
Car01g02271 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 997 - -
Car01g02271 1003 MobiDBLite consensus disorder prediction 979 994 - -
Car01g02271 1003 Gene3D - 636 975 IPR029052 -
Car01g02271 1003 Gene3D - 71 196 IPR015915 GO:0005515
Car01g02271 1003 CDD MPP_Bsu1_C 652 954 IPR041758 -
Car01g02271 1003 Gene3D - 197 456 IPR015915 GO:0005515
Car01g02271 1003 MobiDBLite consensus disorder prediction 35 61 - -
Car01g02271 1003 PIRSF STPPP_BSU1 30 1003 IPR012391 GO:0004721|GO:0009742
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 700 727 IPR006186 GO:0016787
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 735 762 IPR006186 GO:0016787
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 768 792 IPR006186 GO:0016787
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 806 832 IPR006186 GO:0016787
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 896 916 IPR006186 GO:0016787
Car01g02271 1003 PRINTS Serine/threonine phosphatase family signature 918 934 IPR006186 GO:0016787
Car01g02271 1003 MobiDBLite consensus disorder prediction 979 1003 - -
Car01g02271 1003 MobiDBLite consensus disorder prediction 564 585 - -
Car01g02271 1003 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 997 - -
Car01g02271 1003 Pfam Kelch motif 331 377 IPR011498 GO:0005515
Car01g02271 1003 MobiDBLite consensus disorder prediction 546 585 - -
Car01g02271 1003 Pfam Calcineurin-like phosphoesterase 700 907 IPR004843 GO:0016787
Car01g02271 1003 MobiDBLite consensus disorder prediction 548 563 - -
Car01g02271 1003 SMART pp2a_7 672 956 IPR006186 GO:0016787
Car01g02271 1003 SUPERFAMILY Metallo-dependent phosphatases 657 963 IPR029052 -
Car01g02271 1003 MobiDBLite consensus disorder prediction 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02271 Car-Chr1 48454025 48469008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02271 664 899 Calmodulin-binding Proteins AT5G63870 29.779 8.25e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02271 - - gmx:100790406 1797.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02271 01 48454025 48469008 Car01g02271 01 48454025 48469008 ECH
Car06g03302 06 61838935 61856341 Car01g02271 01 48454025 48469008 ECH
Car01g02271 01 48454025 48469008 Car06g03302 06 61838935 61856341 PCT