Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02267 ATGGGTTTTTTGTTGAAAGAAGTTTTGAAGACTCTGTGCAATCGGAATCAGTGGTCTTATGCTGTGTTCTGGAAGATTGGTTGCAACAATTCCAAGCTATTAATTTGGGAAGAATGCTATCATGAACCCTTGTTATGTCCTTCCCCTCGTGGCATAGTAGGGATGTCTAATTTTCCTAATCAGAATGGGGAAGGATGCTGGTTTTCTTCCGAGTCTCAATCGTTTCATCTAGGAATTCAAGAGGAGGACAAAGTCTCTTCTTTGATTAACAAAATGACAGTAAATAATTTAGTCATTGTTGCAGGTGAAGGTATGATTGGACGGGCTGCATTTACCAACAGTCATCAATGGATTCTCTTGAACAATTTCGCAAAAGATGCATATCCACCTGAGGTATATGCTGAAGTGCATCACCAATTTTCAGCTGGAATGCAGACTGTAGCAGTTATTCCTGTGCTTCCTCATGGGGTTGTTCAACTTGGTTCTTTCTTGCCCATAATGGAAAATATGGGATTTGTGCATGAAGTCAAGAGCTTGATCTTGCAATTGGGGTGTATTCCTGGTGCCCTTCTATCTGAAGACTATTCAGAAAAACTTTCAAATGAAAGACTCACTGAACGTGCTACTTCTGGTGTGCCTATGCCTGTTGATTCATCGGTTGTTACTTCAAATTGCACTCCTTCAATAATTAATATCGATAATCGACAAAGTTATTTATCTCATGCTTCAAAGCCTAATATTCAAACCCTTTGTCCATTAAGGGAAAAAATTAGTAAATGTCAGGGTTCTGAATGGACACCCCAAACCCATAATCTGAATGAGATATCCAATAAACTTTTCCAAGAGGATAGAGTTGTGGAGGCTGAAGTAATACCCTCAAATTTTAATTCAAGCCTGCAACAGCATTCTGTTGCATATAATGCAAGATCTGAATTCAATAATCTAAGTTCTGGCAGTACTTCGTTACTTAGAGGAATCCCAGTACATGGTGGGATGAATAGTATTTTGGGGACAAATCTGATTACTAGTTCAAAATTTCCTAAAGTATCTGCAACAAATTTATCTGGATCCCAAGTTGGGAATGAACTTCAAAATGACGATTCGACTAATGCAGCGCGTCATTCTCGGGCAAATTTGGCTAGTCGGTCAGGTGCCTATGACTTGCTTCAGGCCCCTAACATTCCCTCTTTTAATGTTGAGGATCATATCCCGGGTTTTGTCCATGATTGCTTTCATGAGGACAGTACCAATCAATCTGCAATGACCATGGGTTCTGAACACAAAGAAGCCTGTGCTCAACCTCCATCAGGTGATGACCTGTTTGATATTTTAGGTGTGGATTTTAAGAACAAACTTCTAGAAGGACACTGGAATGAACTCTTTGCCGATGAATCAAATGCAGATGTCGAAAATAAGGTTAAAAAGGAAATATGCACGAACGTGGAGGGTACGAATTCCGATTATTATTCAGTTGACGAATCAATGTTGGACAGTGGCATTTTTTCTGGGATGTCAACAGACCACCTCTTGGATGCCGTGGTCTCGAAGGCCAAACCTAGTTTGAAACAGAGTTCTGATGACATGTCTTGCAGGACAGCATTGACTGTTAATAGTACCTCGTCTATTCCTTCTCCTGTCAGTAGATCGATTATGGCTGGTAATTTCGAAGGCGGGTTGTTTGATTTTTCTAAGTATAGAGGTAAAAAAGTTGCAGTAGAAACTAGTTCTCTAAGGTCCGGTTGTAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTACCATATGTGGATCTCGACTTAGTTCGTGGTTGGAGAATGGTGGCAATGTGAAACATGAAAATAGTGTTTCAACTGGATACTCTAAGCGACCGGACGAAGCTTGCAAATCTAATCGCAAAAGGCTGAAACCAGGAGAGAATCCTAGGCCTCGACCTAAAGATCGGCAAATGATTCAAGATCGTGTCAAAGAATTACGAGAAATCGTTCCAAATGGAGCAAAATGTAGCATTGATGCGCTGCTGGAACGGACGATTAAGCATATGCTTTTCTTGCAAAGTGTGACAAAGCATGCTGACAAGCTCAAACAGAGTGGGGAGTCTAAGATTATTAGTAAGGAAGGTGGGTTGTTATTGAAAGACAACTTTGAGGGAGGGGCTACATGGGCGTATGAGGTTGGCTCCCAATCGATGGTTTGTCCTATTATAGTCGAAGATTTGGATCCTCCTCGTCAGATGCTAGTGGAGATGCTTTGCGAGGAACGGGGTTTCTTTCTTGAAATAGCTGACTTAATCAGAGGATTAGGGTTAACCATCTTGAAGGGGGTAATGGAAGCCCACAACGGCAAAATCTGGGCACGTTTCGTTGTTGAGGCAAATAGGGATGTTACGAGGATGGAAATATTTATGTCACTCGTTCGTCTTCTCGAGCAAACGATGAAGGGTAATGCGTCTTCGTCCAATGCAATCGACAACATGATCGGTTATAACTCTTTACCCCAGAACCCTACCCAGATAGCAGCAACTGGAAGGCCTAATAGTATGAAATGA 2547 0.4146 MGFLLKEVLKTLCNRNQWSYAVFWKIGCNNSKLLIWEECYHEPLLCPSPRGIVGMSNFPNQNGEGCWFSSESQSFHLGIQEEDKVSSLINKMTVNNLVIVAGEGMIGRAAFTNSHQWILLNNFAKDAYPPEVYAEVHHQFSAGMQTVAVIPVLPHGVVQLGSFLPIMENMGFVHEVKSLILQLGCIPGALLSEDYSEKLSNERLTERATSGVPMPVDSSVVTSNCTPSIINIDNRQSYLSHASKPNIQTLCPLREKISKCQGSEWTPQTHNLNEISNKLFQEDRVVEAEVIPSNFNSSLQQHSVAYNARSEFNNLSSGSTSLLRGIPVHGGMNSILGTNLITSSKFPKVSATNLSGSQVGNELQNDDSTNAARHSRANLASRSGAYDLLQAPNIPSFNVEDHIPGFVHDCFHEDSTNQSAMTMGSEHKEACAQPPSGDDLFDILGVDFKNKLLEGHWNELFADESNADVENKVKKEICTNVEGTNSDYYSVDESMLDSGIFSGMSTDHLLDAVVSKAKPSLKQSSDDMSCRTALTVNSTSSIPSPVSRSIMAGNFEGGLFDFSKYRGKKVAVETSSLRSGCSKDDAGNCSQTTTICGSRLSSWLENGGNVKHENSVSTGYSKRPDEACKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQSGESKIISKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLDPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAHNGKIWARFVVEANRDVTRMEIFMSLVRLLEQTMKGNASSSNAIDNMIGYNSLPQNPTQIAATGRPNSMK 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02267 848 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 1 316 - -
Car01g02267 848 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 314 847 - -
Car01g02267 848 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 635 684 IPR011598 GO:0046983
Car01g02267 848 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Car01g02267 848 CDD bHLH_AtLHW_like 639 708 - -
Car01g02267 848 MobiDBLite consensus disorder prediction 607 650 - -
Car01g02267 848 MobiDBLite consensus disorder prediction 625 650 - -
Car01g02267 848 MobiDBLite consensus disorder prediction 607 621 - -
Car01g02267 848 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 314 847 IPR043561 GO:0003700|GO:0006355
Car01g02267 848 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 316 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02267 Car-Chr1 48410066 48416607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02267 438 832 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 51.250 2.22e-114 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02267 - - cam:101492357 1697.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02267 01 48410066 48416607 Car01g02267 01 48410066 48416607 ECH
Car01g02267 01 48410066 48416607 Car06g03308 06 62093808 62100562 PCT