Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02239 ATGGCACCGAAGAAGGAAAAGGCTCCACCACCGTCGTCAAAGCCGGCGAAATCCGGAGGaggaaaacagaagaagaagaagtggagcaagggaaagcaaaaggaaaaAGTCAACAACATGGTCTTGTTTGATCAATCTACCTATGATAAGCTTCTCACTGAAGCTCCCAAATACAAACTCATCACTCCTTCAATCCTCTCCGATCGTCTCAGGGTTAATGGATCTTTGGCACGTCGTGCAATCAAAGACCTAATGGCGAAAGGGTTGATTAGGTTGGTATCTGCACATGCTAGCCAACAGATTTACACTAGAGCCACTAATACTTGA 327 0.3945 MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQSTYDKLLTEAPKYKLITPSILSDRLRVNGSLARRAIKDLMAKGLIRLVSAHASQQIYTRATNT 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02239 108 Gene3D - 21 108 - -
Car01g02239 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
Car01g02239 108 MobiDBLite consensus disorder prediction 1 36 - -
Car01g02239 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Car01g02239 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02239 Car-Chr1 48210310 48211325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02239 1 108 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 87.037 6.65e-54 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02239 K02975 - rcu:8285336 154.451