Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02214 ATGGACCCATGGCTCGACGATCTAACCGATGACCTCCAAAGTCTAAGTTTCGCCTCCACAACAACAACCACAACTGTCACCGCCGACATCAAACGCAGTAGTAGCACAAGCTTTGGTTCCGAAACAACCGCCTCAACTTCCGCTCGTCTCTTCCCCGGATCCCTACCTCACATCACCAAACCTCACGCTCCTTCTTCCGACCCTCGCTGGTCCGCCATCCACCGGATCCAATCAGAATCTCCTTCTCGCCGTATTCTCCCCTCCGACCTTCGATTCTCCCGCCGTCTCGGCTCCGGCGACATCAGTTCCGTTTACTTGGCTGAACTCAACGACGACGGTAAACTTCCGGCGATGTTCGCCGCGAAAGTTATGGATAAGAAGGAACTTATTAGTCGGAGTAAAGAAGGAAGAGCTAAAACGGAGAGAGAAATCCTTGAATCGCTTGACCATCCTTTTTTGCCTACTCTTTATGCTACAATTGACGCTGCGAAATGGCTCTGTTTGTTAACGGAGTTTTGTCCCGGCGGTGACCTTCATGTTCTCCGACAACGCCAGCCCAACAAACGCTTCCAGGAACCTGCTGTCAGATTCTACGCTTCAGAGGTGTTGATGGCACTTGAATACCTTCACATGTTGGGAATAGTATACCGTGATCTGAAACCTGAGAATGTGTTAGTTCGATCAGATGGTCATATCATGCTAACAGATTTTGACCTCTCGTTAAAATGTGATGATGATTCCACACCAACGGCCCAGATCATCTCCAACCAAAACTCTCCACAAGTACCCCCACATAAAAATCCCCACAACGAACCCTCTCAATTCGCCTCCTCTTCTTGCATAATACCGAATTGTATAGTCCCAGCAGTATCCTGTTTCAACCCAAAACGCAAGCGAAAGAAGAAGCAAAACCTGCGTACTGGGCCTGAGTTTGTTGTTGCTGAGCCCATTGATGTACGGTCCATGTCATTTGTGGGGACCCACGAATACTTAGCTCCTGAAATCGTGTCAGGGGAGGGACACGGTAGTGCTGTTGATTGGTGGACCTTAGGAATATTTATATTCGAATTATTCTATGGCGTGACACCTTTTAGAGGTTTGGATAATGAACTAACACTAGCAAATATTGTGGCTCGAGCTTTGGAGTTCCCAAAGGAACCAACCGTGCCAGCCACGGCAAAAGATCTTATCTCACAGTTGTTGATTAAAGACCCAACAAGGAGGTTGGGATCAACAATGGGAGCTTCTACCATCAAACACCACCCATTTTTCCAAGGTGTTAATTGGGCATTGTTAAGGTGTACACCTCCACCTTATGTTCCACCACCTTATACTACTAAAGAAGTTGTATCTGATGAGAGTTGTCCACAAACTCCTGTTGATTATTATTGA 1392 0.472 MDPWLDDLTDDLQSLSFASTTTTTTVTADIKRSSSTSFGSETTASTSARLFPGSLPHITKPHAPSSDPRWSAIHRIQSESPSRRILPSDLRFSRRLGSGDISSVYLAELNDDGKLPAMFAAKVMDKKELISRSKEGRAKTEREILESLDHPFLPTLYATIDAAKWLCLLTEFCPGGDLHVLRQRQPNKRFQEPAVRFYASEVLMALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDDSTPTAQIISNQNSPQVPPHKNPHNEPSQFASSSCIIPNCIVPAVSCFNPKRKRKKKQNLRTGPEFVVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGLDNELTLANIVARALEFPKEPTVPATAKDLISQLLIKDPTRRLGSTMGASTIKHHPFFQGVNWALLRCTPPPYVPPPYTTKEVVSDESCPQTPVDYY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02214 463 Pfam Protein kinase domain 321 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02214 463 Pfam Protein kinase domain 93 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02214 463 Gene3D Phosphorylase Kinase; domain 1 89 176 - -
Car01g02214 463 SMART serkin_6 90 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02214 463 MobiDBLite consensus disorder prediction 32 54 - -
Car01g02214 463 ProSiteProfiles Protein kinase domain profile. 90 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02214 463 MobiDBLite consensus disorder prediction 255 275 - -
Car01g02214 463 Gene3D Transferase(Phosphotransferase) domain 1 177 248 - -
Car01g02214 463 CDD STKc_phototropin_like 88 434 - -
Car01g02214 463 MobiDBLite consensus disorder prediction 32 52 - -
Car01g02214 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Car01g02214 463 PANTHER FLIPPASE KINASE 1-RELATED 1 463 - -
Car01g02214 463 SUPERFAMILY Protein kinase-like (PK-like) 71 449 IPR011009 -
Car01g02214 463 Gene3D Transferase(Phosphotransferase) domain 1 320 442 - -
Car01g02214 463 PANTHER OS11G0150700 PROTEIN 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02214 Car-Chr1 47935552 47940878 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02214 1 463 AGC Kinase Gene Family AT3G44610 65.481 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Car01g02214 Pkinase 1.1e-34 CL0016