Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02207 ATGAGATTGGAGAAATGTTGGTTTTGTTCTTCAACCGTATACCCTGGACATGGAATCCAGTTTGTCCGTAATGATGCAAAGATATTTCGGTTTTGTAGATCAAAATGCCACAAGAACTTCAAAATGAAGAGGAATCCTCGTAAAGTGAAATGGACCAAGGCATATAGACGAGTCCATGGAAAGGATATGACACAGGATTCAACCTTCGAGTTTGAGAGGAAACGAAACAGGCCCGAGAGATACGACAGGAATCTTGCTGATAATGTACTCAAGGCCATTCCTAAGATTGATAAGATCAGAGTCAGTAGGGAGGAGAGACACCATAAGAATAGGATGAAAGAAAACGAGGCGAAGGGGCAGAGGGAGGCAAAGAAGGAGTTGGAGCAGAGCATCAGTTTGGTCAAAGCTCCTTCCGCATTACAACAAGATCCATCTCTCACCTTACCCAAGACCATAGTCAAGGTTTCACAACAGAAATCAGAGGAGAATCCTCTCATGGAAGAGTGA 507 0.4339 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSTFEFERKRNRPERYDRNLADNVLKAIPKIDKIRVSREERHHKNRMKENEAKGQREAKKELEQSISLVKAPSALQQDPSLTLPKTIVKVSQQKSEENPLMEE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02207 168 MobiDBLite consensus disorder prediction 102 129 - -
Car01g02207 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Car01g02207 168 PANTHER BNAA04G10330D PROTEIN 1 168 - -
Car01g02207 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 168 IPR000988 -
Car01g02207 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Car01g02207 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Car01g02207 168 MobiDBLite consensus disorder prediction 134 160 - -
Car01g02207 168 SMART 4TRASH 6 44 IPR011017 -
Car01g02207 168 Coils Coil 110 130 - -
Car01g02207 168 MobiDBLite consensus disorder prediction 102 168 - -
Car01g02207 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Car01g02207 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02207 Car-Chr1 47865442 47867183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02207 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 67.262 4.33e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02207 K02896 - gmx:100306000 310.842