Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02198 ATGGAAGAGGGAGGAAGCAGTACCATTGGTAACAATGTAAAGCAAGAAAAGATCAGTTCAAGTAGTACTGATCATCATCATCAGAAGAATCAGATAAAGGAAGAATCAGAGGATGATGAAGAAAGCAGTAGCACTGGTACTGGTTCTGATTACGACAGTTCTCAATCACCATTGAATTCTTCAATTGACATATTGTCACCATTCTCAAAACATCTAAGCAAGAGAAAAGAAGGTCCTCAAATTTCTGCTGATAATTCTCCAAAGAGCACTAAAAGAAAAGAACGCCATCCTGGTTCCGGATCCACTCAAAAAACCGCTGCTGACCTCGGTGAGGATTGTATTGGAGAAGCTGGACGAAGATTTACATCTCATATCTTAAATTTGAAGGCTGGGGAGGATGTGGCGGAGAATATATTAAATCTTTCTAGGGCATGTAAACGTCAATCTGTTATCATACTTTCTGCAAGCGGTACTGTATCTAACGTTACCCTTCGTGTCCCAGATGGCGGTGATGCTTCTTTCACATACCAGGGAATTTTTCATTTACTTTCTTTATCTGGATCATATATTTTTACCACCAAACCAGCTAGAGGTCACCGTCGTCGCAAAGAGATGTTATTTTCCATTTTAATGTCTGATATTAATGGAAAGGTTTTTGGAGGTAGTATCGCGAATTCCCTCATTGCGGCCGGCCCCCTTCAAGTTGTTGTAGGCACTTTCAAGCAAGAAGGCTATAAGGAACCGAGGGAAAACAAAAAATCAAATGAATCATCTCCTGTTGTTGCTGCTCCGCCACAAAAAATGTTTGGTGGTAATTCAAATTCAGAAAAAGTTATCCCTGGAGAAGATTCCAAAATATTTGTAGAAGGACATACTAATTGCCCTTCACCAACATCTGGATTTTTGCCAACTACTCATGATCATCAAGCTGCTGCAAATAATGATCAAGCTTCAAACGATCAAGCTGCAACCCATGATGATCAAGCTTCAAACAGTCAAGCTGCAACTCATGCTGATCAAGCTGCAAACAATAAAACTGCAATTCACGATGATCAAGCTGCTGCAAATAATCAAACTGCAACTCATGATGATGAAGCTGCAAATAATTTGGATAATAACTCTATTTATGTGGATGGCACAAATGAAACTGTATAG 1155 0.3957 MEEGGSSTIGNNVKQEKISSSSTDHHHQKNQIKEESEDDEESSSTGTGSDYDSSQSPLNSSIDILSPFSKHLSKRKEGPQISADNSPKSTKRKERHPGSGSTQKTAADLGEDCIGEAGRRFTSHILNLKAGEDVAENILNLSRACKRQSVIILSASGTVSNVTLRVPDGGDASFTYQGIFHLLSLSGSYIFTTKPARGHRRRKEMLFSILMSDINGKVFGGSIANSLIAAGPLQVVVGTFKQEGYKEPRENKKSNESSPVVAAPPQKMFGGNSNSEKVIPGEDSKIFVEGHTNCPSPTSGFLPTTHDHQAAANNDQASNDQAATHDDQASNSQAATHADQAANNKTAIHDDQAAANNQTATHDDEAANNLDNNSIYVDGTNETV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02198 384 MobiDBLite consensus disorder prediction 245 384 - -
Car01g02198 384 PANTHER DUF296 DOMAIN PROTEIN 37 353 - -
Car01g02198 384 MobiDBLite consensus disorder prediction 1 18 - -
Car01g02198 384 MobiDBLite consensus disorder prediction 291 384 - -
Car01g02198 384 MobiDBLite consensus disorder prediction 46 67 - -
Car01g02198 384 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 247 - -
Car01g02198 384 CDD DUF296 122 240 IPR005175 -
Car01g02198 384 ProSiteProfiles PPC domain profile profile. 118 262 IPR005175 -
Car01g02198 384 MobiDBLite consensus disorder prediction 1 108 - -
Car01g02198 384 Pfam Plants and Prokaryotes Conserved (PCC) domain 123 241 IPR005175 -
Car01g02198 384 MobiDBLite consensus disorder prediction 19 36 - -
Car01g02198 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 37 353 IPR039605 GO:0003680
Car01g02198 384 Gene3D - 122 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02198 Car-Chr1 47755951 47758205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02198 91 269 AT-hook Motif Nuclear Localized (AHL) Family AT2G33620 41.758 1.16e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02198 - - cam:101498107 737.643