Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02190 ATGTCTTTAACTTTAACTTGTCCGCACCAACAACACTTTCGTTTTCAACCTTCACTCACTCGCACCAAGTACTTCTTCTCCGATTCTCGCACTCTTCTTCGCCGGAGAGAGATCTCCGTCACTTCACCGCCGGCGCTGAAGCCGGTGAAATGCTTAAGCAGATCCACGGAGGAGAAGCAGTGGAGCGACGCCGAAACCGTCGCATCTGATTCCGATGAAGTTGTGGATGATAGTGGGAATGGTCAGACTCCAAGCCGAACTTCTTCTGTTGAGTCTCAGAAGATTGTCACCACATCTTCCGGCGATTCTCTTTCTCTCGGAATTCGAGAACCTGTTTATGAAGTTGTAGAAGTGAAATCAGATGGAACAGTGTCGACTAGAAAAATCAACCGGAAACAATTATTGAAGTCAAGTGGTCTTCGTCCACGGGACATCCGAAGTGTGGATCCATCATTGTTTTTGACAAATTCAATGCCTTCTTTGCTGGTCCGTGAGTATGCTATACTTCTAAATCTGGGTTCACTAAGAGCAATAGCAATGAAAGACTGTGTACTAATATTTGACTATACTCGTAAAGGAGGACAAGCTTTTCTAGAGTCATTGTTGCCTCGGTTGAACCCAAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTCGAGGTTGTTGAAGCAGCATTACTTTCAAGAATACAACGTTTGGAGCGGAGATTGATGGACTTAGAACCTCGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGATAACTGGTGACATATTGGAGCAACTTCGTACTAGCAAACAAACTTTGGTTGAGTTAGGCTCGAGGGCAGGAGCTCTCAGACAGATGCTGCTAGACCTTCTGGAGGACCCCAATGAAATACGGAGGATATGTATCATGGGAAGAAACTGTACACTTAATAAAGGAAACAATAACGTGGAATGCTCAGTGCCCTTAGAAAAGCAGATTGCTGATGAGGAGGAGGAGGAAATCGAGATGCTTTTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGTCAAGCTGAAAGGCTTCTTGATTCGGCAAGGGAAATGGAAGATTCTATAGCTGTCAGTTTGAGCTCAAGAAGGCTTGAGGTTAGCAGGGTGGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAATTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACTTGAGGTCCTATCTTGAGGAACGTGTGGTGAGTTATTGTCTAAAATCTTATTTTGTGCATAACTTACTTGATGAAACTTCAAATATAGGTTATTTTAGAATATGA 1311 0.4378 MSLTLTCPHQQHFRFQPSLTRTKYFFSDSRTLLRRREISVTSPPALKPVKCLSRSTEEKQWSDAETVASDSDEVVDDSGNGQTPSRTSSVESQKIVTTSSGDSLSLGIREPVYEVVEVKSDGTVSTRKINRKQLLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDCVLIFDYTRKGGQAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRITGDILEQLRTSKQTLVELGSRAGALRQMLLDLLEDPNEIRRICIMGRNCTLNKGNNNVECSVPLEKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRVELLLQVGTFCVAIGALVAGIFGMNLRSYLEERVVSYCLKSYFVHNLLDETSNIGYFRI 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02190 436 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 49 417 IPR039204 -
Car01g02190 436 Gene3D Magnesium transport protein CorA, transmembrane region 190 373 - -
Car01g02190 436 CDD Mrs2_Mfm1p-like 115 409 IPR039204 -
Car01g02190 436 MobiDBLite consensus disorder prediction 73 94 - -
Car01g02190 436 Coils Coil 231 251 - -
Car01g02190 436 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 49 417 - -
Car01g02190 436 MobiDBLite consensus disorder prediction 51 94 - -
Car01g02190 436 Coils Coil 322 342 - -
Car01g02190 436 MobiDBLite consensus disorder prediction 52 66 - -
Car01g02190 436 Gene3D - 108 189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02190 106 418 MRS2 Gene Family AT5G22830 81.789 1.16e-177 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02190 K16075 - gmx:100808371 615.535