Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02189 ATGGCGGAGGACCGCAAAGAGATGAGTGATTACAGTTCGGAGGATGAAGGAACTGAAGATTACAGACGCGGTGGATATCATTCGGTTCGGATTGGTGACACTTTCAAAAATGGGTGTTATGTTGTTCAGAGTAAGCTTGGTTGGGGTCATTTTTCCACTGTTTGGCTTGCTTGGGATACTCAAAAAttgCGATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCACTACACTGAAGCGGCAATGGATGAAATTAAGATTCTCAAACAAATTGCAGACGGGGATATGGGCGACAAGAAATGTGTTGTGAAGCTTTTGGACCACTTTAAGCATTCAGGGCCAAATGGCCAGCATGTTTGTATGGTGTTTGAATTCCTTGGTGATAATCTTCTCACACTTATCAAGTATAGTGATTATCGAGGTGTTCCCCTTGCCATGGTCAAAGAAATTTGTTACCATGTTTTGGTGGGTTTGGATTATTTGCACCGCGAGCTTTCTATAATACACACTGACTTGAAGCCGGAGAATGTCTTACTTCTCTCTCCAATTGATCCATCTAAAGATCCTAAAAAATCAGGAGTCCCACTTATACTTCCAAACACCAAGGAGAAGACCGTGTCCAAGAATGGAATCATAAAAGACGATAAAAGCTCGAATGGAGATCTAACCAAGAACCAGAAAAAGAAAATGAGGAAAAAGGCTAAAAAAGCAGCTCAAGTATCTATTGGGAAGGAAAGTCCCGAGGTAGAAGAGGATGATTCAAAAACACCTGAGCAAGATGATACTAGTAATGATGTGAAGCCAAATGTAGAATGTGGTGAAGCGAAACCTAATAGTCGTGCAAGTAAAGATGAATCGGCCAAGACTTCTGAAACTAAGGATGTTTCACAAGGAAGTCATAGTCGTAGGAGAGGTAGCCGCTCTACGAGAAAGAAGTTACTTGAAGCTGCTGATCTTAAGTGCAAGCTGGTGGATTTCGGTAATGCTTGTTGGACGTATAAACAATTTACAAATGATATTCAGACAAGGCAGTATAGATGTCCCGAGGTTCTTTTGGGTTCTAAATACTCAACTACGGCAGATATGTGGTCCTTTGCTTGCATTTGCTTTGAGCTTACCACTGGCGATGTTCTTTTTGATCCTCACAGTGGTGATAACTATGACAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGCAAGATTGCACTTGGCGGCCGCTACTCTCGGGACTTTTTCAATAGATATGGTGATTTGAGACACATTCGCCGGTTACGATTCTGGCCTCTTACTAAGGTGCTGACTGAGAAGTATGATTTTAGCGAGCAAGATGCAACTGACATGGCTGACTTCCTCGTTCCATTACTCGACTTTGTTCCTGAAAAGAGGCCAACAGCTGCTCAGTGCCTTAATCATCCATGGTTGAGTGCAGGTCCTCGGACTCTTGAGCCCTCACTGGCTAACATGCAACCTGATTCTATTGACGGAGAAAAGACTATAAAGTCTAGTGAAAAAGCCGAGCAGGAAGCTGTGGAAGTTAGTATGGGGAATATGGCCATCAATGGGACTTCAAAGCCACTCAAAGACCTCCAATCTACAAAGCCATCAGAATAG 1632 0.4283 MAEDRKEMSDYSSEDEGTEDYRRGGYHSVRIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKLRYVALKIQKSAQHYTEAAMDEIKILKQIADGDMGDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVPLAMVKEICYHVLVGLDYLHRELSIIHTDLKPENVLLLSPIDPSKDPKKSGVPLILPNTKEKTVSKNGIIKDDKSSNGDLTKNQKKKMRKKAKKAAQVSIGKESPEVEEDDSKTPEQDDTSNDVKPNVECGEAKPNSRASKDESAKTSETKDVSQGSHSRRRGSRSTRKKLLEAADLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTTADMWSFACICFELTTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLTKVLTEKYDFSEQDATDMADFLVPLLDFVPEKRPTAAQCLNHPWLSAGPRTLEPSLANMQPDSIDGEKTIKSSEKAEQEAVEVSMGNMAINGTSKPLKDLQSTKPSE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02189 543 SMART serkin_6 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02189 543 Gene3D Transferase(Phosphotransferase) domain 1 123 482 - -
Car01g02189 543 SUPERFAMILY Protein kinase-like (PK-like) 35 490 IPR011009 -
Car01g02189 543 MobiDBLite consensus disorder prediction 207 225 - -
Car01g02189 543 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 540 - -
Car01g02189 543 MobiDBLite consensus disorder prediction 205 310 - -
Car01g02189 543 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02189 543 Pfam Protein kinase domain 317 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02189 543 CDD STKc_SRPK 29 481 - -
Car01g02189 543 ProSiteProfiles Protein kinase domain profile. 40 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02189 543 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Car01g02189 543 MobiDBLite consensus disorder prediction 181 200 - -
Car01g02189 543 PANTHER SERINE KINASE-LIKE PROTEIN 8 540 - -
Car01g02189 543 MobiDBLite consensus disorder prediction 277 301 - -
Car01g02189 543 MobiDBLite consensus disorder prediction 522 543 - -
Car01g02189 543 MobiDBLite consensus disorder prediction 523 543 - -
Car01g02189 543 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Car01g02189 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02189 Car-Chr1 47649018 47652152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02189 7 531 EF-hand Containing Proteins AT5G22840 69.101 0.0 741
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Car01g02189 Pkinase 2.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02189 K08832 - gmx:100791829 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02189 01 47649018 47652152 Car06g03408 06 63939707 63944553 PCT