Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02184 ATGGCAATCGGAATGGATATGATGTCGGTACCTTGGTTGGAAAAATTGTTGGCGATGACAACATTCTTCACAGCATGTGAAGTTCATTTCAATAAGACCAAAAATGAGTGTAACAAGTTCTGCCTTGATTGCAATGACCGTGCATTATGTGGATCTTGCATTAAATCGGGTCACAAAGATCATCGAGTAATCCAAATAAGGAGATCATCTTATAATGAAGCTGTTAAGACAACGGATATTTACAAACATGTGGATATTCTTGGAATTCAAACATATGTGATTAATAGTTCAACAGTTGTATTCTTGAACAAAAGGGCTCGTACACAACCTAAGAGGAATAATAGGGTTGGTAAATGTTATAGTAGTGACTCTCTTTGTAGGATATGTGAAAGAAATCTCGTCGACACTTCTTTCTTTTGCTCTTTGGCTTGTAAGCTTGCATGGATAAAAGAGAATGATGGCTTTTTTGTGAGCGCAAAAGAAAGAGAAGAATTGGAAAAACTACTTGAGGAATCCATCAAAGTATCACCTGCAAAAGAAAAAGCCAAATTGGTCGAACAAAATCGAAAACGAAAACTGgaaggagacgaagaagatcaagagcgggaaaatgaagaggtttcggaagaaaacgaagaagatgaagaaaaagacgaagaagaaAGTGTACTTTCTAGTATTCGTCCCCCAGGTTCACTTCGTAAACCAAATTCAAGAAGAAAAGGAATACCTCATAGGGCACCTTTTTTTTAA 753 0.3254 MAIGMDMMSVPWLEKLLAMTTFFTACEVHFNKTKNECNKFCLDCNDRALCGSCIKSGHKDHRVIQIRRSSYNEAVKTTDIYKHVDILGIQTYVINSSTVVFLNKRARTQPKRNNRVGKCYSSDSLCRICERNLVDTSFFCSLACKLAWIKENDGFFVSAKEREELEKLLEESIKVSPAKEKAKLVEQNRKRKLEGDEEDQERENEEVSEENEEDEEKDEEESVLSSIRPPGSLRKPNSRRKGIPHRAPFF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02184 250 Coils Coil 190 220 - -
Car01g02184 250 MobiDBLite consensus disorder prediction 199 220 - -
Car01g02184 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 249 - -
Car01g02184 250 Pfam PLATZ transcription factor 67 146 IPR006734 -
Car01g02184 250 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 249 - -
Car01g02184 250 MobiDBLite consensus disorder prediction 180 250 - -
Car01g02184 250 MobiDBLite consensus disorder prediction 180 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02184 Car-Chr1 47601096 47602980 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car01g02184 PLATZ 2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02184 - - cam:101499108 449.514