Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02168 ATGGTGGAAGATGATGAAGGGTATCAAAGGAAAGCAAAGATTGCAGTTGTTGCTATTATTGTGCTTGCTTCTGTAACTGTCTTTGCTTCTTTTGTTGCTTTTGGTTACTATTGTTACATCTGTAGCAAAGTTTCTAAACGACGTCGTATAAGCCATAAAGTCGAAGACGCTAGCCTTAACGAAAAAAGCGACTTTGCAAACCTGCAAGTTGTTGCCGAGAAAGGACTTCAGGTGTTCACTTTCAAGCAGCTGCATTCTGCTACTGGTGGCTTCAGCAAATCAAATGTTGTTGGTCATGGTGGATTTGGACTTGTTTACCGTGGCGTGCTCAACGATGGTAGGAAGGTTGCAATTAAGTTCATGGATCAAGCAGGAAAGCAAGGAGAAGACGAGTTTAAAGTAGAGGTGGAATTGCTAAGTCGGTTGCATTCTCCGTATTTGCTTGCATTGCTTGGATACTGCTCTGATAACAATCATAGGCTGCTGGTGTATGAATTCATGGCGAACGGTGGCCTGCAAGAGCATCTTTATCCTATCAGCAGTAACAATTCCAGTGTTGCACGCATTAGTTTAGATTGGGAAACTCGATTAAGAATAGCACTTGAAGCTGCCAAGGGCTTGGAGTATCTTCATGAACATGTCAGCCCTCCAGTGATTCACAGAGATTTTAAGAGCAGCAACATCCTCTTGGACAAAAAATATCATGCTAAAGTTTCTGATTTTGGATTGGCAAAGCTTGGACCTGATAGAATCGGCGGACATGTTTCAACTCGCGTGTTAGGCACCCAAGGATATGTTGCCCCCGAATATGCATTAACAGGGCACTTAACAACAAAATCAGATGTCTACAGTTATGGTGTTGTACTTTTGGAGCTTCTCACCGGCCGACTGCCGGTCGATATGAAGAGACCTCCAGGGGAAGGCGTACTCATTACTTGGGCTTTGCCCCTTTTGACGGATAGAGAAAAGGTTGTAAAGATCATGGATCCGGCATTGGAGGGACAGTACTCAATGAAAGATGTTATCCAGGTAGCGGCGATTGCGACAATGTGTGTGCAACCAGAAGCAGATTATAGGCCTCTCATGGCAGATGTTGTGCAGTCTTTGGTTCCACTTGTAAAGACTCATAGATCCACCTCAAAGGTAGGAAGCTGCTCTAGTTTCCATTCCCCCAAGTTGTCACCTGCTCAACATGTAGTTAATGCAAATATGTAA 1215 0.4395 MVEDDEGYQRKAKIAVVAIIVLASVTVFASFVAFGYYCYICSKVSKRRRISHKVEDASLNEKSDFANLQVVAEKGLQVFTFKQLHSATGGFSKSNVVGHGGFGLVYRGVLNDGRKVAIKFMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHRLLVYEFMANGGLQEHLYPISSNNSSVARISLDWETRLRIALEAAKGLEYLHEHVSPPVIHRDFKSSNILLDKKYHAKVSDFGLAKLGPDRIGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRLPVDMKRPPGEGVLITWALPLLTDREKVVKIMDPALEGQYSMKDVIQVAAIATMCVQPEADYRPLMADVVQSLVPLVKTHRSTSKVGSCSSFHSPKLSPAQHVVNANM 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02168 404 ProSitePatterns Protein kinases ATP-binding region signature. 97 119 IPR017441 GO:0005524
Car01g02168 404 CDD STKc_IRAK 97 372 - -
Car01g02168 404 Gene3D Phosphorylase Kinase; domain 1 51 166 - -
Car01g02168 404 ProSiteProfiles Protein kinase domain profile. 91 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02168 404 Gene3D Transferase(Phosphotransferase) domain 1 167 387 - -
Car01g02168 404 SUPERFAMILY Protein kinase-like (PK-like) 73 369 IPR011009 -
Car01g02168 404 Pfam Protein kinase domain 92 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02168 404 PANTHER OS07G0227300 PROTEIN 3 398 - -
Car01g02168 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Car01g02168 404 PANTHER OS01G0750732 PROTEIN 3 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02168 Car-Chr1 47376159 47379111 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02168 2 395 Receptor kinase-like Gene Family AT3G58690 75.888 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Car01g02168 Pkinase 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02168 - - gsj:114372917 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02168 01 47376159 47379111 Car01g02168 01 47376159 47379111 ECH