Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02157 ATGCAATTAGAAGCTGCAAATAAGACAGTGGAATCGCTTCGGTTAGAAGGCGCAAATGTTTTAGAAGCTTATCAGTCCTTAGCCTTAGAATTGGAACAATCAAAGGCTCAAGTAAAATCATTGGAGGAACTTGTGAGAAAATTGGAGGCTAATTTAGTCAGTGTAGATAACAAGAATGCACTGGAAGTTGTCGAAAGCGATGAGATAAACCAGCTCAAAGCCGAGCTTGTCTCAATTAAAGCTGAAGCATCAAGTGCTAGCAGTAAAGTTGAAAGGGAAATAATTTCAGTGGAGGAAGTGTTTGAGCAGCTGAAATGTTCAAGAGAAGGATTAACATCAGAGGAAGGATCAAATCATCTTCAATTATTTGGACCAAACAAGTTGGAAGAGAAAAAGGAGAGCACATTTTTGAAGTTCTTAGAGATTATGTGGAACCCTTTATCATGGGTTATGGAAGCTACTGCATTAATGGCAATTGCTTTGGCTAATGATAGTGGAAGACCTCCTGATTGGCAGGATTTTATTGGTATTATTGCTCTTTTGGTTATTAATTCAGCAATCAGGTTCATTGAAGAAACTGATGCTGGTAATTCTGGGTTTAAGTCTACCATTCATGATTCTGTTGATAGGGATGATGAGAAAGTGCCGCCAGAGTTTACAGAGATTGAAAAAATTGTTCAGGCAGTGATAAAATCATTGGATCATAAATTCTCAGGGTTTACCAATGATCTCGTTGGGATGCAACCTCGCATAGAAGAATTAGAAAAGCTTCTAAAATTGAGCTAA 786 0.3791 MQLEAANKTVESLRLEGANVLEAYQSLALELEQSKAQVKSLEELVRKLEANLVSVDNKNALEVVESDEINQLKAELVSIKAEASSASSKVEREIISVEEVFEQLKCSREGLTSEEGSNHLQLFGPNKLEEKKESTFLKFLEIMWNPLSWVMEATALMAIALANDSGRPPDWQDFIGIIALLVINSAIRFIEETDAGNSGFKSTIHDSVDRDDEKVPPEFTEIEKIVQAVIKSLDHKFSGFTNDLVGMQPRIEELEKLLKLS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02157 261 Coils Coil 69 89 - -
Car01g02157 261 Gene3D - 142 236 - -
Car01g02157 261 SMART Cation_ATPase_N_a_2 91 163 IPR004014 -
Car01g02157 261 PANTHER CALCIUM-TRANSPORTING ATPASE 88 198 - -
Car01g02157 261 Coils Coil 24 58 - -
Car01g02157 261 SUPERFAMILY Calcium ATPase, transmembrane domain M 93 198 IPR023298 -
Car01g02157 261 PANTHER PLASMA MEMBRANE ATPASE 88 198 - -
Car01g02157 261 Pfam Cation transporter/ATPase, N-terminus 96 157 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02157 Car-Chr1 47230158 47231790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02157 90 192 Primary Pumps ATPases AT2G07560 73.786 2.49e-47 166