Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02156 ATGTATCTTATAGAGACTCCGAAGTTTTTTTGGACCCCAAAACTTGAGCGGCTAGATTTTACCGGATGCACAAACTTAAGACAGAGAGTTCTATGCCTCTCTGGTTGCACAAAACTTGAAAAGACGCCAGATTTTACCGGGGCATCAAATCTTGCGTATCTTGATATGGAAGGATGTACAAGTTTACCTACAATCCATGGATCCATTGGGGCTCTTTCAAAGCTTAGATTATTGAATTTGAGGGATTGCAAAATTCTTGTTGGAATACCCAATAGCATTAATACCATGACTTCTCTTGTAACTCTAGATTTATGTGGCTGCTTGAAGTTTAAAACTCCGCCCCTCGGACAGATCACTCTCAGGTCTTCTCGTCTGGAATCTTTGATTTTTCTTGATGTAAGCTTTTGCAATCTTCATGAAGTACGAGATGCTATTATACTGCTGAAGCATCCCCATAACTTTCGGTGCGGCTTTGACATTGTTGTTCCTTGGGATTGGAAAAACATTGATTGTCCATCAAGTTGTTGTATTCCAAAATGGTTCAATCACCAATTTGACGGGGGTTCAATAGTAAGGATAATAGATTTTGATGAGGGTGACAAGAAGTTTGGCTTTGCCTTCTGTGTGGCATTTGAGGTAAACAATCATCCTGCGAATTCTGGTTCTCCACAAGATTCATTTTCCTCAGCTCTGCCGCATCCTTTTTATCTTTCTTTTGAAAGTGAACACATGGAGGAACGCTTTGATATGCCACTCAGTTTGGAACTGCACAAAATTGATGGCTCCAAACTTCTTTGGGTAATCTATATCTCTCAAGAGCATTGCCACTTTTTAAAAACTGGAGCGCATATCACATTTAAAGCCTTCCCAGGTTTGATCATAAAGAAATGGGGATTGCGCATGCTACTCGAGAATCAAATGACATATTCTTGTCTTAGCTCATTGGATTTCTTTAAGGAATCTGATGCCCACCAACTTGTCTTAGATTATGTACAAGAAACCAGCAGCATGTCAGGACCTAAAATCCAGCTTCCCTACAATTGGTTGATATGCCAACCACAGCCAAAACTTGCAACACGTTCCCTGAGCCTTGAGGTACTGTTATTCTATGTCTGTGGAGGTGAAAGGAGCATAATATATTCATTGAAGCATGTTGACAACAGATTGACGCATACAATTGAAACAAACTGTTATCCCTATTTTCTATGA 1209 0.3995 MYLIETPKFFWTPKLERLDFTGCTNLRQRVLCLSGCTKLEKTPDFTGASNLAYLDMEGCTSLPTIHGSIGALSKLRLLNLRDCKILVGIPNSINTMTSLVTLDLCGCLKFKTPPLGQITLRSSRLESLIFLDVSFCNLHEVRDAIILLKHPHNFRCGFDIVVPWDWKNIDCPSSCCIPKWFNHQFDGGSIVRIIDFDEGDKKFGFAFCVAFEVNNHPANSGSPQDSFSSALPHPFYLSFESEHMEERFDMPLSLELHKIDGSKLLWVIYISQEHCHFLKTGAHITFKAFPGLIIKKWGLRMLLENQMTYSCLSSLDFFKESDAHQLVLDYVQETSSMSGPKIQLPYNWLICQPQPKLATRSLSLEVLLFYVCGGERSIIYSLKHVDNRLTHTIETNCYPYFL 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02156 402 Pfam C-JID domain 177 305 IPR045344 -
Car01g02156 402 PANTHER TMV RESISTANCE PROTEIN N-LIKE 34 134 - -
Car01g02156 402 SUPERFAMILY L domain-like 12 149 - -
Car01g02156 402 Gene3D Ribonuclease Inhibitor 3 175 IPR032675 -
Car01g02156 402 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 134 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02156 Car-Chr1 47222836 47228209 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02156 3 148 WRKY Transcription Factor Family AT4G12020 27.684 1.50e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02156 - - mtr:MTR_2g083510 306.99