Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02148 ATGGCTAGTATTATTTTAAGGTCTAATGAAGTAGTTCATGCTTTTGTCTTGTTATGTCTCTTGGTGTTGATGCACAAAGGTGATGCCTATGAATTTGTAGTTGGAGGACAAAAGGGATGGAGTGTTCCAAGTGACCCTAATGGCAACCCTTATAATCAATGGGCAGAAAAGAGCAGATTTCAAGTAGGAGACTCCCTAGTGTTCAATTACCATTCAGGTCAAGACTCAGTAATTCAAGTAAATAGCCAACAAGACTATGATAGTTGCAACACTGATGCATCTTCTGATAAATTCTCTGATGGCCACACAGTAATAAAACTCAGTCAATCAGGGCCTCATTTCTTCATTAGTGGAAACAAAAATAGCTGTCTCAAGAATGAGAAGCTATTGGTGATTGTGCTTTCTGACAGAaccaacagaaactcaaacaccaaccaaacaacaacttcaccttctccttctccttctccttctgtttctgtttttgtttctccttctccttctcctttatcttcacattcATCAGATGCATTAGCTCCTTCACTACCACCTTCTCAGCTAGAAGGTTCATCCCCACCACCTCCTCAGATAGAGGGTTCATCTCCACCACCAGTGACTGAGGTAACAAATCCAACTCCAACTCCAGCTCCTGTTACAGAACCTCCTCCTCCTAATGCTGCTTCTTCAATCTTGGTCAGCTTTGTTGGTTCTGTTGGAGCACTCATGGTTTCAGCTCTGGTTGTTTCCAAGTAA 753 0.3586 MASIILRSNEVVHAFVLLCLLVLMHKGDAYEFVVGGQKGWSVPSDPNGNPYNQWAEKSRFQVGDSLVFNYHSGQDSVIQVNSQQDYDSCNTDASSDKFSDGHTVIKLSQSGPHFFISGNKNSCLKNEKLLVIVLSDRTNRNSNTNQTTTSPSPSPSPSVSVFVSPSPSPLSSHSSDALAPSLPPSQLEGSSPPPPQIEGSSPPPVTEVTNPTPTPAPVTEPPPPNAASSILVSFVGSVGALMVSALVVSK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02148 250 Pfam Plastocyanin-like domain 40 125 IPR003245 GO:0009055
Car01g02148 250 PANTHER BLUE COPPER PROTEIN 8 249 IPR039391 GO:0009055
Car01g02148 250 Gene3D - 30 147 IPR008972 -
Car01g02148 250 CDD OsENODL1_like 30 134 IPR041846 -
Car01g02148 250 SUPERFAMILY Cupredoxins 29 134 IPR008972 -
Car01g02148 250 ProSiteProfiles Phytocyanin domain profile. 30 135 IPR003245 GO:0009055
Car01g02148 250 MobiDBLite consensus disorder prediction 137 228 - -
Car01g02148 250 MobiDBLite consensus disorder prediction 137 185 - -
Car01g02148 250 MobiDBLite consensus disorder prediction 186 224 - -
Car01g02148 250 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 8 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02148 Car-Chr1 47100139 47101557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02148 11 235 Phytocyanin Superfamily AT3G20570 42.667 2.59e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02148 - - gmx:100788637 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02148 01 47100139 47101557 Car01g02148 01 47100139 47101557 ECH