Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02145 ATGAGAATTTTCAAGGAAGCAAAGACTTCCTTATTGTTGTTGTTATTTGTTTTGTCGGGTTTGGAAATAATATGCCAGGGACAAGATAGCACATTTCCAGACCCGACAACGTCTCCGCCGCCACCACATGCGACGGAACTCGACAATTGCGATGGAATATTTCTAACGTACAGTTTGACAGGAAGGGAGAAGGAATATCCGCACGTGAAAAACATGTCGAAACAAGCATGGGCATTTAAAGCTGAAGCATCGTTAATGAACGTTGGAGACGAGGAATTGAAAGGTTGGAAGATGTTTATTGGGTTTCAGCATAGAGAGATTCTTGTCTCGGCCGATGGCGCTGTTCCGATCGATTCGGAGGATTTTCCGGCGGAGGTAGGGAATGGGACTACACTTTCCGGGAACCCTATGGCGGACTTGAAGACGGCGATAGAAACAGCGGGTGATTTTAATCAAATGGCTGTTAGGGTTCAGATGAGTGGGACTCAATTTGGCCTTGGTGCTAATGCTACACCTATGCCTAAGACTATTAAACTTGTTAATGATGGTTTTAAATGTCCCCAACCTAGTAGTAAAGGCTCAAGAATGTTTGTATGCTGCAGAAAAGACCCAAAAGCAAAAGCCAAAATAGACAAGAAAACAAAGTTCCTTCCTCGTCGCTATGGGGATCTAACCATAGCTTACGACGTGCTTCAAGCCTTCCAAACCAACTACTATGCACAAATAACCATAGACAACAATCATCCATTAGGTCGCCTTGATCATTGGAACTTAACATGGGAATGGCAACGAGGCGAATTCATATACTCGTTAAAAGGCGCTTACGCTCGCATAAAAGACCCTTCTGAATGTTTATATGGTCCTGCAGGTAAATACTATGGTGACTTAGATTTCTCACAAGTTGCAAATTGTCAAAAAAGGCCTATTCTCTCTGATCTTCCAGTTGAAAGAGCAGAAGATGAAAAAGTTGGTAAATTACCTTGGTGTTGTAAGAATGGTACTGTTTTACCACCTATTATGGATAAGAACAGAGCTAGATCACTTTTTCAGTTACAAGTTTTCAAAATGCCACCCGATGATAACAGAACAGCACTTACACCACCAATGAAATGGCACATTGATGGTGTTATTAACCCTAAATACACTTGTGGACCACCAATTAGGGTTGATTCACAACAATTTCCTGATCCAAGTGGACTTAAAGCAATTTCAACAGCTGTTGCTAGTTGGCAAATAAGTTGCAACATTACCAAACCAAAGCCGCAACAGAATCGTTGCTGCATTTCATTCTCAGCTTTCTACAATGAATCTGCTATCCCTTGTAACACATGTGCTTGTGGTTGTGATGACACAAGGAAATGTAATGCTAATGCTTCACCTTTACTTCTTCCGCCTGAAGCTCTTCTTGTACCTTTTGTCAATCGAACTTTGAAAGCACACGCTTGGGCAAAACTCAAACATATGAAAGTTCCTAACAAGTTGCCTTGTGGAGATAATTGTCCTGTTAGTATTAACTGGCACGTTAGTTCTGATCATAAGGAAGGATGGACGGCTAGAATTACCATTTTCAATTGGGAAGATTTTGCTTTTGAAGATTTGTTCAAGGTCTTTCGAAGATTTTCAAGATGTTTATTCGTTTAA 1641 0.4101 MRIFKEAKTSLLLLLFVLSGLEIICQGQDSTFPDPTTSPPPPHATELDNCDGIFLTYSLTGREKEYPHVKNMSKQAWAFKAEASLMNVGDEELKGWKMFIGFQHREILVSADGAVPIDSEDFPAEVGNGTTLSGNPMADLKTAIETAGDFNQMAVRVQMSGTQFGLGANATPMPKTIKLVNDGFKCPQPSSKGSRMFVCCRKDPKAKAKIDKKTKFLPRRYGDLTIAYDVLQAFQTNYYAQITIDNNHPLGRLDHWNLTWEWQRGEFIYSLKGAYARIKDPSECLYGPAGKYYGDLDFSQVANCQKRPILSDLPVERAEDEKVGKLPWCCKNGTVLPPIMDKNRARSLFQLQVFKMPPDDNRTALTPPMKWHIDGVINPKYTCGPPIRVDSQQFPDPSGLKAISTAVASWQISCNITKPKPQQNRCCISFSAFYNESAIPCNTCACGCDDTRKCNANASPLLLPPEALLVPFVNRTLKAHAWAKLKHMKVPNKLPCGDNCPVSINWHVSSDHKEGWTARITIFNWEDFAFEDLFKVFRRFSRCLFV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02145 546 PANTHER COBRA-LIKE PROTEIN 7 8 536 - -
Car01g02145 546 PANTHER COBRA-LIKE PROTEIN 10 8 536 - -
Car01g02145 546 Pfam COBRA-like protein 238 417 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02145 Car-Chr1 47080052 47083183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02145 1 534 COBRA Gene Family AT3G20580 62.709 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02145 - - gmx:100789175 863.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02145 01 47080052 47083183 Car01g02145 01 47080052 47083183 ECH