Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02143 ATGTCTGAATTAGACGCACAAATTCCTACTACCTTCGATCCTTTTGCTGAGGCAAATGCTGAGGATTCCGGTGCTGGGACAAAAGAGTATGTGCATATTCGTATACAGCAGCGAAATGGTAGAAAAAGCTTGACAACTGTGCAGGGATTGAAGAAAGAATTCAGTTACAACAAGATTCTTAAAGACCTTAAGAAGGAGTTTTGTTGTAATGGTACAGTTGTCCAGGACCCAGAGCAAGGACAGGTTATTCAACTTCAAGGTGATCAGAGGAAGAATGTATCTACATTCCTAATTCAGGCTGGTATCGTGAAGAAGGAGCATATCAAAATTCATGGTTTCTGA 342 0.4064 MSELDAQIPTTFDPFAEANAEDSGAGTKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPEQGQVIQLQGDQRKNVSTFLIQAGIVKKEHIKIHGF 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02143 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Car01g02143 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Car01g02143 113 MobiDBLite consensus disorder prediction 1 25 - -
Car01g02143 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Car01g02143 113 PANTHER PROTEIN TRANSLATION FACTOR SUI1-LIKE PROTEIN 1 113 - -
Car01g02143 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Car01g02143 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Car01g02143 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
Car01g02143 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Car01g02143 113 Gene3D - 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02143 Car-Chr1 47060766 47063680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02143 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 1.29e-74 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02143 K03113 - jre:108983673 223.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02143 01 47060766 47063680 Car01g02143 01 47060766 47063680 ECH