Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02130 ATGGTTGGAACTCAGATTAATGGAAGAAGACTCTCTTTTGGAGTTGTAAATGGTGGACATGATCTTGGACCTAGTAGTACTCCACCAAGTAATGCTGGGTCTGATTATGGAAGCTTTATAGAGTTCACAAGAGAAGATGTGGAAACTTTGCTAAATGAGAAATCCAAAAGGAAAGATAGATTTAATTACAAGGAAAGATGTGAAAATATGATAGATTATATAAAAAGGCTTAAGGTTTGCATAAGATGGTTCCAAGACCTTGAACTGAGCTACTCATTAGAGCAAGAGAAGTTAAAGAGTTCATTGGAATTATCCCAGCAGAAATGCATGGAAATCGAGTTGCTGCTCAAAATCAAGGAAGAAGAGCTGAATTCAATTATCACAGAAATGAGAAGGAGTTGCACTAATTTGCAAGAGAAATTAGTGAAGGAAGAAACTGATAAATCGGCTGCAATGGAATCTCTTATTAAAGAGAGAGAGGCTAGGCTTGACTTTGAAAGGTCACAAACTACACTATCTGAAGATCTCGGTCGAGCTCAACGTGAGCTTCAAACTGCTAATCAGAAGATAGCGTCACTCAACGACATGTACAAGCGATTACAAGAGTATATAACAAGCTTGCAGCAGTACAATGGAAAACTTCATTCTGAGCTTTCTTCAGTTGAAGGTGAACTCAAGCGTGTAGAGAAAGAGAAAGCGACCGTAGTGGAAAATCTCACCATGTTAAAGGGCCAACTTACTTTGTCTATGGCTTCTCAAGAAGAAGCTACAAAACAGAAGGAAGCTTTTTCTAGCGAAGTTGCGTCCCTTAGAGTAGAGTTGCAACAAGTGAGGGAGGACCGAGACCGCCAAATATCTCAAGTGCAAACTTTAAGTACTGAAATAGTGAAGTTTAAAGATTCTACAGAGAAATCTGGCTCTGAATTGAACAACTTGACCATGAAAACAAATGAATTGGAGGCAAAATGTACTTTGCAAGATAATCAGGTGAAGGAATTACAAGAGAAGCTAACAATTGCGGAAAACAAACTCGAGGTTTGTGATATATCTGCAATTGAGACGAGAACAGAATTCGAAGGACAACAAAAACTTGTAAATGAGTTACAAAGACGATTGGCAGATGCGGAATACAAACTTATAGAAGGGGAGAAGCTGAGGAAAGAATTACATAACACCATTTTGGAACTGAAAGGTAACATCCGGGTGTTCTGTCGAGTGCGGCCTTTGTTACCTGATGAAGGTTGCAGCACAGAAGGAAAGATTATATCTTATCCTACCTCCATGGAAGCTTCGGGACGCGGCATTGAATTGGCACAAAATGGCCAAAAACATTCTTTTACATTTGATAGAGTTTTTGCACCTGATGCTTCACAACAAGAAGTTTTTACAGAAATTTCACAGCTTGTGCAAAGTGCTCTTGATGGTTACAAGgtttgtatttttgcatatggtcagacaggttccggaaaaacctatacaatgatgggCAGGCCCGGACATCCCGGAGAAAAAGGCTTGATACCTCGTTCGCTAGAACAAATATTTCAAACACGGCAGTCACAGCAACCGCAAGGATGGAAATATGAAATGCAGGTGTCAATGTTGGAAATATACAACGAAACCATTCGGGATTTGTTGTCTACAAATAAGTCCTCATCAGACGCAACTCGTGTAGAAAATGGTACACCTGGGAAGCAATACACGATCAAACACGATGCCAATGGAAACACACATGTTTCTGATCTTACAGTGGTGGACGTTCAAAGTGTAAAAGAGGTCGCGTTTCTTTTAAATCAAGCGGCAAACAGCAGATCTGTGGGGAAAACTCAGATGAATGAACAATCTTCAAGAAGCCATTTCGTATTCACACTTCGAATATACGGTGTAAATGAGAGCACTGACCAACAAGTACAAGGCATTCTAAATCTCATTGATCTTGCCGGGAGCGAGCGTCTTTCAAGGAGTGGCTCAACCGGGGACCGATTGAAAGAAACTCAAGCAATAAATAAAAGTTTGTCATCATTAAGTGATGTTATATTTGCCTTGGCCAAGAAGGAAGATCATATTCCATTCAGGAACTCAAAGCTTACATACCTACTTCAGCCTTGTCTAGGTGGAGACTCAAAAACATTAATGTTTGTAAACATCTCTCCTGACCAAGCTTCAGCCGGAGAATCACTCTGCTCGCTCCGGTTCGCTTCAAGAGTCAATGCTTGTGAAATTGGGACACCTCGGCGTCAAACCAATGGTCGCCCTACAGAATCTCGCCTGAGCTATTTCTAA 2283 0.3964 MVGTQINGRRLSFGVVNGGHDLGPSSTPPSNAGSDYGSFIEFTREDVETLLNEKSKRKDRFNYKERCENMIDYIKRLKVCIRWFQDLELSYSLEQEKLKSSLELSQQKCMEIELLLKIKEEELNSIITEMRRSCTNLQEKLVKEETDKSAAMESLIKEREARLDFERSQTTLSEDLGRAQRELQTANQKIASLNDMYKRLQEYITSLQQYNGKLHSELSSVEGELKRVEKEKATVVENLTMLKGQLTLSMASQEEATKQKEAFSSEVASLRVELQQVREDRDRQISQVQTLSTEIVKFKDSTEKSGSELNNLTMKTNELEAKCTLQDNQVKELQEKLTIAENKLEVCDISAIETRTEFEGQQKLVNELQRRLADAEYKLIEGEKLRKELHNTILELKGNIRVFCRVRPLLPDEGCSTEGKIISYPTSMEASGRGIELAQNGQKHSFTFDRVFAPDASQQEVFTEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPGEKGLIPRSLEQIFQTRQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNKSSSDATRVENGTPGKQYTIKHDANGNTHVSDLTVVDVQSVKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGILNLIDLAGSERLSRSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHIPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQASAGESLCSLRFASRVNACEIGTPRRQTNGRPTESRLSYF 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02130 760 Coils Coil 358 385 - -
Car01g02130 760 Pfam Kinesin motor domain 405 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 737 IPR027417 -
Car01g02130 760 Coils Coil 316 350 - -
Car01g02130 760 Coils Coil 169 203 - -
Car01g02130 760 Coils Coil 253 294 - -
Car01g02130 760 Coils Coil 127 147 - -
Car01g02130 760 SUPERFAMILY Tropomyosin 210 380 - -
Car01g02130 760 Gene3D Kinesin motor domain 345 741 IPR036961 -
Car01g02130 760 PRINTS Kinesin heavy chain signature 475 496 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 PRINTS Kinesin heavy chain signature 609 626 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 PRINTS Kinesin heavy chain signature 640 658 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 PRINTS Kinesin heavy chain signature 689 710 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 SMART kinesin_4 397 747 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 MobiDBLite consensus disorder prediction 551 573 - -
Car01g02130 760 CDD KISc_C_terminal 397 741 - -
Car01g02130 760 PANTHER KINESIN-LIKE PROTEIN KLP-3 8 759 - -
Car01g02130 760 PANTHER KINESIN-LIKE PROTEIN 8 759 - -
Car01g02130 760 ProSiteProfiles Kinesin motor domain profile. 399 739 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Car01g02130 760 Coils Coil 211 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02130 Car-Chr1 46880198 46885989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02130 84 751 Calmodulin-binding Proteins AT5G65930 30.781 1.47e-78 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02130 K10405 - gmx:100801196 1303.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02130 01 46880198 46885989 Car01g02130 01 46880198 46885989 ECH
Car01g02130 01 46880198 46885989 Car06g01901 06 18959403 18965118 PCT