Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02128 ATGGTAATTCAACAATATATGGGTGTCATAAAGTCTACATTTTGCATTGTTTTGGTTCTCAATATTGTAGCAGCTGTTGTCACCATTAATGTAGGAAAGAAGGAAACAGAAGATGAATTCATTACCCAACTGTTTGATCCTGCATCTGGACTATTGGATGAGGACACGGCAGAAATGCTATGGATCACTTGCATGGAAGATTTGACTCATGTAAAGAAACAAATTGGAGATGTTGGCAACAATGAAATTAACTCAGAATTTGGATCAATAACAAGAGAAAACATCCAAAAATTGATTAGTACTTGCAATCCACAGTTGAAGGAAAACTACCTTAACTGTTTGAGAAAAAATATTGCTCCATTCCAAGATGAATCCAACAATTTGATTGTTGCTTATGGGGAATCAGTTTCATCAAGAAGATATCTACGTCGTGTTTTTCCTCGACACCTAGCAGAAAAACAAGAggaagatgacaatgaaaacaaaggtgatgatgatgatgatgatgacgaggacgagaaagattctgatgaATCGTCTAAAAAAGATAAAAATGGTAGTGATTCTGATAAATCGTCAAAGAAGAAGTCGTCCAAGTCTAAACGTCGTGATCGCGAGAAAGCAGTTCAAAATGCCATAGCTATAACTGCATTGGTGACATTTATATTTGCAGCATTTATCTTTTTATGTTGTTGTAGGTGTTGTGGGAGTGGCAGAGTTAGACAAAATGATGAGAGGCCACTTCTCAGCATGAGCATGAGTGACTACTCTGTTGGTTCTTCTACAAATAATCACCCTTCAAAGATGTCACTAAAAGAGGAGAAACATGGAGTTCAATCAATAAGTAGTAGTACTTTCGTTGATGACACAAATAACTCATTGCAAGAAGGTCAAATAGCAAGTGCTGCTGCAAGACCATCATTTGATCTTAAACCTCCACCTGGTAGGGTAGTAGCAGCTGGAATTCCACCTTTGAAACCTCCTCCTGGAAGGATTGATCCTCTTCCACCATTGGCTCAGCCTATCGATTACGCTGTAAAtcctcctcctcctccacctcctccAGGACTAATACCAAGCCCCAACGGTGGTGGTCCTAGGcctcctccaccaccaccaccaccGCTGAAGTCTGGCAATAGTGGTCCTAGGCCTCCTCCACCACCACCGCTAAAGCTTGGCAATGGTGGTCCTAGGCCTCCTCCACCACCACCACCTGGTGCAAAACTAGGTGGTCCTCGTCCACCACCGCCTCCTAGGAGTGGTTCCGGTCCTCCAAGACTTCCACCATTTGGCCAAAAGAGTCCTAAACCTTTAGCTAGTGCACCAAAGGTTCAAGGGAGTGTTGAAGTTGTTTCAGAAAGTGAAAGTGATGTTCCAAAAGCTAAGTTAAAGCCTTTTTTCTGGGATAAGGTTCAAGCCAACTCAGATCAAACTATGGTTTGGAATCAACTAAAAGCAGGATCATTCCAGTTTAATGAAGAAATGATGGAAACACTTTTTGGCTATACTGCTCCACCAGCGGAAAAAGGCAAAGCTGGACAGAAGAAAGAGTCTTCCTTCAATGATCCTACACCTCAGTTTATCCAAATTGTTGACTCAAAGAAAGCACAAAACTTAGCAATTCTGTTGAAAGCGTTGAATGTGACACTAGAAGAAGTTCGAGATGCCCTACTTGAAGGAAATGAGCTCCCTACAGAATTCCTTCATACCTTGATGAAGATGGCACCAACCTCAGACGAAGAACTTAAGCTTAGACTTTACAATGGTCATATTTCTCAACTTGGTCCTGCGGATCGCTTCCTGAAAGCACTGGTTGAGATTCCATTTGCTTTTAAACGAATGGACGCATTGCTTTACATGGGAACTCTTCAAGAAGAACTCACCATGACCAGAGACTCTTTTTCAATTTTAGAGATTGCTTGTAAGGAACTAAGAAGCAGTAGATTGTTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACAGGAAACCGAATGAATGATGGAACATTCCGCGGAGGTGCACTTGCATTCAAACTCGACACGCTGCTAAAATTATCTGATGTAAAAGGAGTAGATGGAAAAATCACACTTTTACACTTTGTTGTCCAAGAGATAATCCGAACAGAAGGAATAAGAAAAGCTCGAATGGTGAAAGAAAGTAGTAGTTTCTCTAGTATAAAAACTGATGACCTTCTCGAAGACATTACACACGAATCAGAAGATCACTACCATGAACTCGGTCTTGAAGTTGTTTCACATTTGAGCAGCGAACTCGAGAATGTGAAGAAAGCAGCAGCATTAGATCCTGATAGTTTGATAGGAACAACAGCTAGATTAGGCCATGGTTTAATAAAAACAAGAGATTTCGTATACAAAGACTTGGCGAACAATGTAGAGAATGATAAAGGTTTTCATGAGACAGTTAAGAGTTTTGTTGAAAAAGCTGAAGTTGATGTCACAAAATTGCTTGAAGATGAGAAGAAAATCATGGCTCTTGTTAAAAGTACTGGTGATTACTTTCATGGGAGTTCAGGGAGAGATGAAGGGTTGAGATTGTTTGTAATAGTACGCGATTTCTTAGTAATGTTGGATAGAGTATGCAAAGAGATTCAAAAAGTACCAAGGAAGCCAACAAAGAATGTGAAACAAGATACTAAGCAAGACACTGCTAGTCCTAGTGCTAACTCTAGAGGTTCGTCGTCGGCCTCGGAAAATCGTCTTCCGCCTCCTGATATTCGACAGCGATTGTTTCCAGCAGTGGTAGATAGGAGAGTGGATGATTTTAGTTCAGATGATGATGAGAGTCCATAG 2811 0.3878 MVIQQYMGVIKSTFCIVLVLNIVAAVVTINVGKKETEDEFITQLFDPASGLLDEDTAEMLWITCMEDLTHVKKQIGDVGNNEINSEFGSITRENIQKLISTCNPQLKENYLNCLRKNIAPFQDESNNLIVAYGESVSSRRYLRRVFPRHLAEKQEEDDNENKGDDDDDDDEDEKDSDESSKKDKNGSDSDKSSKKKSSKSKRRDREKAVQNAIAITALVTFIFAAFIFLCCCRCCGSGRVRQNDERPLLSMSMSDYSVGSSTNNHPSKMSLKEEKHGVQSISSSTFVDDTNNSLQEGQIASAAARPSFDLKPPPGRVVAAGIPPLKPPPGRIDPLPPLAQPIDYAVNPPPPPPPPGLIPSPNGGGPRPPPPPPPPLKSGNSGPRPPPPPPLKLGNGGPRPPPPPPPGAKLGGPRPPPPPRSGSGPPRLPPFGQKSPKPLASAPKVQGSVEVVSESESDVPKAKLKPFFWDKVQANSDQTMVWNQLKAGSFQFNEEMMETLFGYTAPPAEKGKAGQKKESSFNDPTPQFIQIVDSKKAQNLAILLKALNVTLEEVRDALLEGNELPTEFLHTLMKMAPTSDEELKLRLYNGHISQLGPADRFLKALVEIPFAFKRMDALLYMGTLQEELTMTRDSFSILEIACKELRSSRLFLKLLEAVLKTGNRMNDGTFRGGALAFKLDTLLKLSDVKGVDGKITLLHFVVQEIIRTEGIRKARMVKESSSFSSIKTDDLLEDITHESEDHYHELGLEVVSHLSSELENVKKAAALDPDSLIGTTARLGHGLIKTRDFVYKDLANNVENDKGFHETVKSFVEKAEVDVTKLLEDEKKIMALVKSTGDYFHGSSGRDEGLRLFVIVRDFLVMLDRVCKEIQKVPRKPTKNVKQDTKQDTASPSANSRGSSSASENRLPPPDIRQRLFPAVVDRRVDDFSSDDDESP 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02128 936 PANTHER FORMIN-RELATED 193 337 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car01g02128 936 PANTHER FORMIN-RELATED 1 122 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car01g02128 936 PANTHER FORMIN-RELATED 338 933 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car01g02128 936 SUPERFAMILY Formin homology 2 domain (FH2 domain) 401 878 - -
Car01g02128 936 MobiDBLite consensus disorder prediction 151 206 - -
Car01g02128 936 PANTHER FORMIN-LIKE PROTEIN 338 933 - -
Car01g02128 936 PANTHER FORMIN-LIKE PROTEIN 1 122 - -
Car01g02128 936 PANTHER FORMIN-LIKE PROTEIN 193 337 - -
Car01g02128 936 MobiDBLite consensus disorder prediction 317 433 - -
Car01g02128 936 MobiDBLite consensus disorder prediction 158 176 - -
Car01g02128 936 Gene3D Formin, FH2 domain 459 899 IPR042201 -
Car01g02128 936 SMART it6_source 454 878 IPR015425 -
Car01g02128 936 ProSiteProfiles Formin homology-2 (FH2) domain profile. 454 889 IPR015425 -
Car01g02128 936 MobiDBLite consensus disorder prediction 875 936 - -
Car01g02128 936 MobiDBLite consensus disorder prediction 303 457 - -
Car01g02128 936 MobiDBLite consensus disorder prediction 177 195 - -
Car01g02128 936 SUPERFAMILY ARM repeat 39 189 IPR016024 -
Car01g02128 936 MobiDBLite consensus disorder prediction 884 907 - -
Car01g02128 936 Pfam Formin Homology 2 Domain 456 863 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02128 Car-Chr1 46860505 46866076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02128 184 926 FH2 protein (formin) Gene Family AT5G54650 50.980 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02128 - - gmx:100792872 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02128 01 46860505 46866076 Car01g02128 01 46860505 46866076 ECH
Car01g02128 01 46860505 46866076 Car06g01900 06 18943971 18950689 PCT