Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02119 ATGGACTCACAGCAACTTTATAGTTTCAATGTAAACAGTGCAGGATTTCCTTACATGTCATCTTTTCCCACTATTCCATCACTGCCAAATCGTATTCTTGGAAACTTGAAAGTCGGTATTGGAAACTCGCCTAATTCACCGTTTTCATCTCATTTCGATTCTGATACTCATTCTGCATTTAGTGACAGCCAGGAGCAACACAACTCAGGAGAAATTCTTTCTGGTATAAGCCCCTCTTATAACTCGTCACTCGAAACCAATCATTATATGCATAGATCAGTTTCATCTGTGAACAGTCTCAAAGAAAGGTTGCAACTATATTCTGCTAGAAATTCACTTCTACAAAGTAACCAGAAAGTGTTGTTGGAACTAGAAACTGCTCTGATGGCACCCGATGATAACGAAGTTACCACGTCTAATTCTTCGTTGGGCGAGAGTGTCAGAGAGACTACATCGGGTCAGAGACATAGATTGTGGAACCACGAGCACCAGGAGTCACAATATATTCAAAGTCAACCATCTTATGTTACAAGCAGCAGGCAATCAAATGAAGCCGTGCATGTAGAGAAACGACGAAAGTTGGAGGAGGAATCATCAACACAAGGGTTTCCATTGAGCGATTTGAAGCAATTGCTGATTGCGTGTGCTAAAGCCATGTCTGAAAACAACACAAAAGATTTTGACCGATTGATAGAAATGGCTAAAAATGTTGTGTCTATCAATGGGGAGCCGATCCAGAGGCTCGGTGCTTATATTGTAGAAGGGCTTGTTGCAAGGAAGGAAGCGTCGGGGAATAGCATCTATCATGCTCTTAAGTGTAGAGAGCCTGAAGGCAAAGATTTACTCTCTTACATGCAACTACTTTTTGAAATTTGTCCTTACTTAAAATTCGGTTACATGGCTGCCAATGGAGCCATTGCTGAAGCTTGCAGGAATGAGGATCACATACATATCATAGACTTTCAGATTGCTCAAGGAACTCAATGGATGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGCGGGGCACCCCACGTGCGGATAACAGGAATCGATGATCCGGTCTCTAAATATGCTCGTGGGGATGGACTAGAAGTAGTTGGGGAAAAATTGGCCTTGATGTCCGAGAAATTTGGAATACCGGTGGAGTTTCACGGGGTTCCTGTTTTCGCTCCGGATATTACTAGAGACATGCTTGATATAAAACATGGAGAGGCTTTGGCTGTGAATTTTCCCTTGCAACTCCATCACACAGCCGACGAGAGTGTCGATGTGAATAATCCAAGAGATGGACTTCTAAGATTGGTGAAATCCCTCTCCCCGAAGGTGGTTACACTCGTCGAGCAAGAATCGAACACAAACACAACCCCTTTCTTCAACAGGTTCATAGAAACTTTAGATTACTACTTGGCGATCTTCGAGTCCATCGATGTCACACTCTCAAGAAACAGCAAGGAAAGAATTAACGTCGAGCAGCATTGTTTGGCCCGAGATATCGTGAATGTCATTGCTTGCGAAGGCAAGGAAAGGGTCGAGCGCCACGAACTGTTCGGAAAGTGGAAGTCGAGGTTTACGATGGCCGGCTTTCAGCAATGTCCTTTGAGTTCTTATGTGAATTCTGTTATAAGAAGCCTTCTGAGATGCTATTCAGAGAATTACACACTACTGGAGAAAGATGGGGCAATGTTGTTGGGGTGGAAGAACAGAAATTTGATATCAGCTTCAGCATGGCATTGA 1737 0.4341 MDSQQLYSFNVNSAGFPYMSSFPTIPSLPNRILGNLKVGIGNSPNSPFSSHFDSDTHSAFSDSQEQHNSGEILSGISPSYNSSLETNHYMHRSVSSVNSLKERLQLYSARNSLLQSNQKVLLELETALMAPDDNEVTTSNSSLGESVRETTSGQRHRLWNHEHQESQYIQSQPSYVTSSRQSNEAVHVEKRRKLEEESSTQGFPLSDLKQLLIACAKAMSENNTKDFDRLIEMAKNVVSINGEPIQRLGAYIVEGLVARKEASGNSIYHALKCREPEGKDLLSYMQLLFEICPYLKFGYMAANGAIAEACRNEDHIHIIDFQIAQGTQWMTLLQALAARPGGAPHVRITGIDDPVSKYARGDGLEVVGEKLALMSEKFGIPVEFHGVPVFAPDITRDMLDIKHGEALAVNFPLQLHHTADESVDVNNPRDGLLRLVKSLSPKVVTLVEQESNTNTTPFFNRFIETLDYYLAIFESIDVTLSRNSKERINVEQHCLARDIVNVIACEGKERVERHELFGKWKSRFTMAGFQQCPLSSYVNSVIRSLLRCYSENYTLLEKDGAMLLGWKNRNLISASAWH 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02119 578 MobiDBLite consensus disorder prediction 47 76 - -
Car01g02119 578 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 578 - -
Car01g02119 578 MobiDBLite consensus disorder prediction 169 183 - -
Car01g02119 578 MobiDBLite consensus disorder prediction 169 199 - -
Car01g02119 578 Pfam GRAS domain family 208 577 IPR005202 -
Car01g02119 578 MobiDBLite consensus disorder prediction 184 198 - -
Car01g02119 578 Coils Coil 97 117 - -
Car01g02119 578 ProSiteProfiles GRAS family profile. 199 578 IPR005202 -
Car01g02119 578 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 578 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02119 Car-Chr1 46788273 46791124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02119 207 577 GRAS Transcription Factor Family AT1G50600 62.264 1.79e-174 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car01g02119 GRAS 3.4e-128 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02119 - - adu:107462432 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02119 01 46788273 46791124 Car01g02119 01 46788273 46791124 ECH