Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02114 ATGGCTGATGATGATCAATTTCATCATTCAAGTGGAAACTCAAATTGGTGGGACACATCAAGAAACAACATGAGGTTTGATCAAAGTGGAACATCACAAACTTCTTCATCTAACAACATAGTTGATTTTGCTTGGCAAAATTCAGATATGGTAGATATAAAACCAAGATCTTCTTCCATGGATGATAACTCTTCTATTGTTTTTCATGATGATACTCAAAAGCTTCAACAACCTCAAGATTCTTCCACAACTTCAATTGATCCTAACTTGCATATGATGGGTTTAGGCCTTTCTTCTCATGCCATGGATTGGAATCAACCACCTTTGATAAGAAGTGAAAAGGGTAGTTCAGAGAACAATTTAAGGTCAATGTTGGAAGAGAATTTGAGTTCAACAAGGAACAATTTTGAGCAAGAAAATATGATGGGGTTATGTCAAGGTCAAATTCAATGGAGATCATCATCAGATCAAAAGTTGTTTTCAGCTGTAGAGTCATCAAGCAATGAATTCAAACAAGTGAATAATAGAAGTTTCTCTTTGGATCAAAATCAATTTAGTCCTTCATATAGTTCTGGTGAAAGCAATGTTACAAGCCAAGGATTAATGGATTATGGAACACCATCAATATTACAAGGACTATTAGGATCTGATCATAGTAATAATATTCAACACCAACAACAACAAGGTTCATTTGAGAATAGACCTATGAGTTTTTCATATACTACAAATAATTATGGATTAAACTCTAATAATGAGTTGAATATTCCTTCTAATTGGTCTACTAAAGTTCCTCAATTTTTGAGAACTAATTCACCTCCAAAACAACAACCACCTAATAACCAATTGCATTTTACTAATAACACCCCCTTTTGGAATGCTTCTGAGGCTGCTAATTCCATCAAGGATGTTAGGTCAAGTTTCTTCCCCTCTTTGCAACCACAATTCTCCACCCCAAATTTTGATTCACAGGCCAAGAATATATCTGAAGTAGGTGTGGTGAAGAAAAGTGGAAGTGAGCCAGCACCCAAAAGGACCCGTAACGAAACCCCATCTACTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAAATGGGAGACAGAATCACTGCACTCCAACAATTAGTGTCACCTTTTGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTTCATGAACAGGTTACAGTTTTGAGCACTCCATATATGAAAAGTGGAGCTCCAACGCAGAATATTCAACAGAATTCAGGTAAATCCAAGAAATCCGAGGGTGCAAAGCAAGATCTTAGAAGCCGAGGGCTATGCTTGGTGCCAGTTTCTAGTACATTTCCGGTGACTCATGAAACAACAGTTGATTTTTGGACACCAACATTTGGAGGGACATCAAGATAA 1407 0.3703 MADDDQFHHSSGNSNWWDTSRNNMRFDQSGTSQTSSSNNIVDFAWQNSDMVDIKPRSSSMDDNSSIVFHDDTQKLQQPQDSSTTSIDPNLHMMGLGLSSHAMDWNQPPLIRSEKGSSENNLRSMLEENLSSTRNNFEQENMMGLCQGQIQWRSSSDQKLFSAVESSSNEFKQVNNRSFSLDQNQFSPSYSSGESNVTSQGLMDYGTPSILQGLLGSDHSNNIQHQQQQGSFENRPMSFSYTTNNYGLNSNNELNIPSNWSTKVPQFLRTNSPPKQQPPNNQLHFTNNTPFWNASEAANSIKDVRSSFFPSLQPQFSTPNFDSQAKNISEVGVVKKSGSEPAPKRTRNETPSTLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPTQNIQQNSGKSKKSEGAKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTSR 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02114 468 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 15 457 - -
Car01g02114 468 MobiDBLite consensus disorder prediction 7 37 - -
Car01g02114 468 MobiDBLite consensus disorder prediction 411 425 - -
Car01g02114 468 MobiDBLite consensus disorder prediction 1 37 - -
Car01g02114 468 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 357 409 IPR036638 GO:0046983
Car01g02114 468 MobiDBLite consensus disorder prediction 411 432 - -
Car01g02114 468 Gene3D - 357 421 IPR036638 GO:0046983
Car01g02114 468 CDD bHLH_AtbHLH_like 353 404 IPR045239 -
Car01g02114 468 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 396 IPR011598 GO:0046983
Car01g02114 468 SMART finulus 358 402 IPR011598 GO:0046983
Car01g02114 468 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 15 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02114 Car-Chr1 46655585 46659656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02114 212 468 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 53.160 7.76e-69 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02114 - - gmx:100778697 589.341