Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02112 ATGTCTTTGATCAAAATGAGTATAATTTTCTACACTTATCTTATACTTATTTATTTTTCTCAAATTTCTCTAGCACTTGATTCTATATCTCAATCCATTCCTCTAAAAGATGATGGCAACACTTTAGTTTCCAAAGATGGAACCTTTGAACTTGGATTCTTCACTCCAGGTAGTAATTCCCAAAAACGTTACCTTGGAATTTGGTACAAGAAAATCCCAATTCAAACAGTAGTTTGGGTTGCAAACAGGGTCAATCCAATCAATGATTCATCTGGAACATTAACCTTAAACATCAACGGTAACCTCGTACTAACTCAAAATGAAACTATTGTTTGGTCTACAACAACAAAAAACTCTCTTGGAAAAAAACAAGTTAATCCAATTGCTTTTCTTTTGGATTCTGGAAATCTTGTTGTAATTGATCAGAAAGAAGCTGAAAAAGAAAAAAAATCATATTTTTGGCAAAGTTTTGATTTTCCAACAGATACTTTTTTACCAGAAATGAAGTTAGGTTTGGATTTTCGAACCGGTCTTAATCGGCGATTAACGGCTTGGAAGAGTCCTAATGATCCATCACCTAGTGATTTTTCATTTGGTTTAGTGTCACATAATAATCCTGATGGATATATGATGAAGGGTGACAAAATTTTCTATAGAAGTGGACCATGGAATGGTTTACATTCAAGTGGTTCACCACAAGTTAGGCCTAATCCTATTTATGAATTTAGGTTTGTTTTTAATAAGGATGAACTTTACTATACTTATAGTCTCAAAAATTCGTCGGTCATTTCGCGATTAGTACTTAATGCAACTGCTTCTGTTCGTAACCGTTATGTTTGGATTGAATCGGCGAAAAGATGGGAGATTTATACTTCGGTACCACTGGATTTATGTGATAACTATGCAATTTGTGGTGCTTATGCGAGTTGTGTTATTTCTGATTCCCCTGTTTGTCAATGTATAGAAGGTTTTGAGGCTAAGTTGCCTCGAGCGTGGAACTCGATGGATTGGTCTAATGGATGTGTTCGAAAAAAGGCGTTACGCTGCGAGGATAAAGAGAAGGATGGATTTGTGAAATTGAGTGGTGTGAAAGGGCCTGATACTACATATAGTTGGTTGGATGAAAGAATTGGTTTGGAGGAATGTAGGGTTAAGTGTTTGGATAATTGTTCTTGTATGGCTTATGCAAATTCAGATGTTAGAGGAGAAGGGAGTGGATGTGCATTGTGGTTTGGTGATTTAATTGATATTAGAAATTTTGCAGCTGGAGGACAGGATTTATATGTTAGAATGGATGCTTCGGAATTAGAACATGTCAATGTGGGATCACACAAGAAGAAAGGAGTGATGGTGGCAGTAACAGTTTTGCTTGCTGTGGCTGCGCTTTCCGGTATACTCATACTTGCTTGGTGTTATAGACAGAAATCAAGCAACAATGTAAAAGATAAATCAGAGTTCATTATCAATGAAGATCAATACAGTGGAATGCAAGTGGATGATGGTGATCTACCAGTCTTTAACTTGTCAACAATTGCAAAGGCCACTAACAACTTTACAGTCAATAACAAAATTGGAGAAGGTGGCTTTGGACCTGTATACAGGGGAATTCTAGCTGATGAAGTGGAAATCGCTGTGAAAAGACTTTCAACAAGCTCAGGCCAAGGATTGAATGAATTTAAAAATGAAGTAAAATTGATTGCAAAACTTCAACATAGAAATCTTGTGAAGCTTCTTGGTTGTTGCCTTGAAGGAGAAGAAAAAATGTTGGTTTATGAATACATGCCTAATAGTAGCTTGGACTCCTTTATTTTTGATAAGGAGAAAAGTGAATTACTAGACTGGTCAAAACGATTCGATATTATATGTGGAATTGCTCGGGGACTTATCTATCTTCATCAGGATTCGAGACTAAGAATTATTCATAGAGATTTGAAAGCTAGTAATGTTTTACTAGATAAGGAATTGAATCCCAAAATATCAGATTTTGGCATGGCTAGAATTTTTGGAGGAGATCAGAAAGAAGGAAACACAAGGAGAATAGTTGGGACATATGGTTACATGGCACCAGAATATGCTACCGACGGTCTATTTTCAGTGAAATCGGATGTCTTTAGTTTTGGTGTTTTATTGATGGAGATTATATCAGGAAAGAGAAGTAGAGGATATTATAATCAAGACCAGATCCATAATCTCATAGGCTATGCTTGGAAACTTTGGAAAGAAGGAAGAGCAATAAAATTGATTGATAAAAGCATAGAAGACACTTGCTTTATGTCACAAGTATTGCATTGCATTCATGTTAGTCTATTGTGTGTTCAACAAAATCCAGAGGATAGGCCTGGAATGTCAAGTGTGATTTTAATGCTAGTAAGTGATTTTGAATTACCTGAACCCAAACAACCAGGATTCTTTTCAAAAGATTCAAGTGAAACAGAATCCTCAACAAGTAAACATCTACTAAGTTCTACAAATGAAATAACCATTACTTTATTAGAAGCTAGATGA 2505 0.3565 MSLIKMSIIFYTYLILIYFSQISLALDSISQSIPLKDDGNTLVSKDGTFELGFFTPGSNSQKRYLGIWYKKIPIQTVVWVANRVNPINDSSGTLTLNINGNLVLTQNETIVWSTTTKNSLGKKQVNPIAFLLDSGNLVVIDQKEAEKEKKSYFWQSFDFPTDTFLPEMKLGLDFRTGLNRRLTAWKSPNDPSPSDFSFGLVSHNNPDGYMMKGDKIFYRSGPWNGLHSSGSPQVRPNPIYEFRFVFNKDELYYTYSLKNSSVISRLVLNATASVRNRYVWIESAKRWEIYTSVPLDLCDNYAICGAYASCVISDSPVCQCIEGFEAKLPRAWNSMDWSNGCVRKKALRCEDKEKDGFVKLSGVKGPDTTYSWLDERIGLEECRVKCLDNCSCMAYANSDVRGEGSGCALWFGDLIDIRNFAAGGQDLYVRMDASELEHVNVGSHKKKGVMVAVTVLLAVAALSGILILAWCYRQKSSNNVKDKSEFIINEDQYSGMQVDDGDLPVFNLSTIAKATNNFTVNNKIGEGGFGPVYRGILADEVEIAVKRLSTSSGQGLNEFKNEVKLIAKLQHRNLVKLLGCCLEGEEKMLVYEYMPNSSLDSFIFDKEKSELLDWSKRFDIICGIARGLIYLHQDSRLRIIHRDLKASNVLLDKELNPKISDFGMARIFGGDQKEGNTRRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLLMEIISGKRSRGYYNQDQIHNLIGYAWKLWKEGRAIKLIDKSIEDTCFMSQVLHCIHVSLLCVQQNPEDRPGMSSVILMLVSDFELPEPKQPGFFSKDSSETESSTSKHLLSSTNEITITLLEAR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02112 834 Pfam Protein tyrosine and serine/threonine kinase 519 786 IPR001245 GO:0004672|GO:0006468
Car01g02112 834 PANTHER - 26 831 - -
Car01g02112 834 CDD PAN_AP_plant 347 430 - -
Car01g02112 834 PIRSF SRK 1 834 IPR024171 GO:0004674
Car01g02112 834 Pfam PAN-like domain 349 417 IPR003609 -
Car01g02112 834 CDD STKc_IRAK 524 789 - -
Car01g02112 834 SMART blect_4 32 160 IPR001480 -
Car01g02112 834 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Car01g02112 834 Gene3D - 22 157 IPR036426 -
Car01g02112 834 ProSiteProfiles Bulb-type lectin domain profile. 26 152 IPR001480 -
Car01g02112 834 SMART ntp_6 352 431 IPR003609 -
Car01g02112 834 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 191 IPR036426 -
Car01g02112 834 Gene3D Transferase(Phosphotransferase) domain 1 594 796 - -
Car01g02112 834 SUPERFAMILY Protein kinase-like (PK-like) 503 808 IPR011009 -
Car01g02112 834 SMART serkin_6 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02112 834 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Car01g02112 834 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 831 - -
Car01g02112 834 ProSiteProfiles PAN/Apple domain profile. 349 432 IPR003609 -
Car01g02112 834 CDD B_lectin 38 160 IPR001480 -
Car01g02112 834 Pfam Domain of unknown function (DUF3403) 793 834 IPR021820 GO:0004674
Car01g02112 834 Pfam D-mannose binding lectin 76 186 IPR001480 -
Car01g02112 834 Gene3D Phosphorylase Kinase; domain 1 478 593 - -
Car01g02112 834 ProSiteProfiles Protein kinase domain profile. 518 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02112 Car-Chr1 46620435 46624864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02112 449 803 Receptor kinase-like Gene Family AT4G23230 54.494 1.26e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car01g02112 PK_Tyr_Ser-Thr 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02112 - - gmx:100778155 1280