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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Car01g02111
ATGAGACAAGCTGGTGAATATTCAAGTTTACTATGTGGTGGAATGTCAAGAAGAACCGGTCCTCATTCATTACCTTTAGCAAGAATAAAGAAAATAATGAAGAAATCTAATGAGGATGTGAAAATGATATCAGGGGTTGCTCCAATTGTTTTCTCCAAAGCTTGTGAGCTTTTCATTGAAGAACTTACAAAGAGCTCTTGGAACATTGCTATTGATGGTAAAAGACGAACTTTGAATAAAGATGATGTTGCTTCTGCTGTTATAGCCACTGATAACTTTGATTTTTTGATCACTTTGGTTTCTAATTCCAATAGCACTCTCATGGAAATGGAAAATATAACATGA
345
0.3449
MRQAGEYSSLLCGGMSRRTGPHSLPLARIKKIMKKSNEDVKMISGVAPIVFSKACELFIEELTKSSWNIAIDGKRRTLNKDDVASAVIATDNFDFLITLVSNSNSTLMEMENIT
114
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Car01g02111
114
Pfam
Histone-like transcription factor (CBF/NF-Y) and archaeal histone
23
87
IPR003958
-
Car01g02111
114
SUPERFAMILY
Histone-fold
18
96
IPR009072
GO:0046982
Car01g02111
114
PANTHER
HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
1
106
-
-
Car01g02111
114
PANTHER
HAP5 SUBUNIT OF HAP COMPLEX
1
106
-
-
Car01g02111
114
Gene3D
Histone, subunit A
4
102
IPR009072
GO:0046982
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Car01g02111
Car-Chr1
46615934
46616278
Transposed
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Car01g02111
22
104
CCAAT-HAP5 Transcription Factor Family
AT1G54830
61.446
8.15e-31
107
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
NF-YC
Car01g02111
CBFD_NFYB_HMF
5.9e-18
CL0012
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Car01g02111
-
-
cam:101503561
224.557
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