Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02103 ATGGATTCTGAAGCAGAGTTCCCAATACTTAATAAGAAGGAATCGGAAGCCATGCAGAACTACTTCGACACTGAATCTCAATTCATAACGGCTAAGAACTTTTACGCATGGCACGAGAACATTCTTCATCGGAGGCTTGCTGTTTCTATAATCGCTAATCTCTCAAGGAGCAATAAACCTGATGCATTGATTCCATATCTTGCAATGAATTATTTTGATCGCTTTATTTCCAACAACGACAAGATCTTCGATGATGTGGAAGGTGATAATGACACTGAAAAGGTTCGGTTGATGGCTGTCTGTTGTCTCACCATATCTGCCAAGATGAGGATAAAATCCTTCTCAGTTGTTAACTTCTTGAGGAACAAAGATATGATGAATATAAGTCATCAGATGATAATGAGACTGGAGCTTTTAATTCTGGATGAACTTCACTGGAAAATGCGATCAGTGACTGCTTTCTGCTTTCTGAATTACTATTACCCTTACTTCAAACAATTTGGTGGTTTCAAACGTCGTTGCATCAATGAGATCATAGTTCAAGCTCAAGGAGAGCACGCCTTCGCTCACTACAAGCCTTCTCAGATTGCATGGTCTGCTTTTATGGCTGCTACCAAAATTGCATATCCCTCAAAGTTTAAACAAATTGCAAATCCCACTGAGTTTCACAAAATAGAGAATCAAAAGGAGCTGGAGAAATGTTGGAATCAGATGGTTGATCTTTGCATTAGATTGAACATCCAGATTGAGTCCGCTGAATCAGGAATACCCCAAGAAGAAATCGAACAAAACAAGGGCAAGGCAGCGGTGGAGGATTCATGTGAAGAAGATGAGACATCTCCGGTGGAGAATATGCAGCAGCTGACGGAGTTATTTGATGATGCACTAGTAACCGAGGTTGAGTCACTTATACCGGGCAGATTGTTGTGGGCTGAGGAATTGGCTGCCGACGAAACATATGATTTTGATAAAGATATACCTTATAAAGAGATTTTGAaacaacgacaaaaacaacagaaaaaacaacaacaacaacaacaaAAGGTGGGCGAGACATCTGATAAAAAAGAAGTAACAGAAAGGGAGATGGAGGACATAATCCGGATATCATTGGTTGAACAGACAGCACAGCCACAGGTGGAGGGAGGACCCATTTCAGAGATTATAGAGATTGTACCAAATAAGCACTTGATGAACTTTGAGCTGAAGTGGCCCACTGATGTGATAGAAGAAGGAGAAATACAAAAGGGGCAGCAAGAACAGCCCCAACCCGTGAACCTCCCCTTTAATACTGGCAGCATTAGCTGCAACATTGGTTAG 1320 0.4008 MDSEAEFPILNKKESEAMQNYFDTESQFITAKNFYAWHENILHRRLAVSIIANLSRSNKPDALIPYLAMNYFDRFISNNDKIFDDVEGDNDTEKVRLMAVCCLTISAKMRIKSFSVVNFLRNKDMMNISHQMIMRLELLILDELHWKMRSVTAFCFLNYYYPYFKQFGGFKRRCINEIIVQAQGEHAFAHYKPSQIAWSAFMAATKIAYPSKFKQIANPTEFHKIENQKELEKCWNQMVDLCIRLNIQIESAESGIPQEEIEQNKGKAAVEDSCEEDETSPVENMQQLTELFDDALVTEVESLIPGRLLWAEELAADETYDFDKDIPYKEILKQRQKQQKKQQQQQQKVGETSDKKEVTEREMEDIIRISLVEQTAQPQVEGGPISEIIEIVPNKHLMNFELKWPTDVIEEGEIQKGQQEQPQPVNLPFNTGSISCNIG 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02103 439 SUPERFAMILY Cyclin-like 15 148 IPR036915 -
Car01g02103 439 CDD CYCLIN 43 141 IPR013763 -
Car01g02103 439 PANTHER CYCLINS 1 416 IPR039361 -
Car01g02103 439 Gene3D - 38 143 - -
Car01g02103 439 Gene3D - 144 290 - -
Car01g02103 439 Pfam Cyclin, C-terminal domain 152 244 IPR004367 -
Car01g02103 439 Pfam Cyclin, N-terminal domain 17 148 IPR006671 -
Car01g02103 439 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 416 - -
Car01g02103 439 Coils Coil 328 348 - -
Car01g02103 439 MobiDBLite consensus disorder prediction 337 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02103 Car-Chr1 46482562 46485393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02103 44 235 Core Cell Cycle Gene Families AT4G03270 30.151 2.86e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02103 - K18812 aprc:113855478 272.322