Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02096 ATGGCATTGATGGCAGCAACAGCAAGCTCAGCAACTGTTGTTAAACAATCTCCTTTCCTTGGACAAAGGAAAGGTGCCAGTGCCAATCCTCTTAGAGATGTTGTCTCCATGGGAACTTCTAAATTCACCATGGGAAATGAATTGTGGTATGGACCAGACAGAGTGAAATATTTAGGACCCTTTTCAGCTCAGACACCTTCATACTTAACTGGAGAATTCCCAGGAGATTATGGATGGGACACTGCTGGTTTATCTGCTGATCCTGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGAAGATGGGCAATGCTAGGAGCACTAGGTTGCATAACACCAGAAGTGTTAGAAAAATGGGTGAGAGTTGACTTCAAAGAACCAGTTTGGTTCAAAGCAGGATCCCAGATATTCACAGAAGGTGGACTTGACTATCTAGGAAACCCAAACCTTGTACATGCACAAAGCATTTTAGCAGTACTAGGTTTCCAAGTTGTTCTGATGGGACTTGTGGAAGGTTTCAGAATCAATGGTCTACCTGGTGTTGGTGAAGGTAACAATCTTTACCCTGGTGGGCAATACTTTGATCCACTTGGTCTTGCTGATGATCCTGTCACATTTGCTGAACTTAAGGTTAAGGAAATTAAGAATGGAAGGTTGGCTATGTTTTCTATGTTTGGTTTCTTTGTTCAAGCTATTGTTACTGGGAAAGGTCCTTTGGAGAATCTTTTGGATCATATTGATAATCCTGTTGCTAATAATGCTTGGGTTTATGCTACCAAGTTTGTGCCTGGTTCTTAA 804 0.4216 MALMAATASSATVVKQSPFLGQRKGASANPLRDVVSMGTSKFTMGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLEKWVRVDFKEPVWFKAGSQIFTEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHIDNPVANNAWVYATKFVPGS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02096 267 Pfam Chlorophyll A-B binding protein 66 233 IPR022796 -
Car01g02096 267 Gene3D Chlorophyll a/b binding protein domain 56 260 - -
Car01g02096 267 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 5 267 IPR001344 GO:0009765|GO:0016020
Car01g02096 267 SUPERFAMILY Chlorophyll a-b binding protein 48 264 - -
Car01g02096 267 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 5 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02096 Car-Chr1 46404195 46405574 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02096 10 266 Chloroplast and Mitochondria Gene Families AT2G05070 68.045 1.44e-123 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02096 K08914 - vvi:100260599 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02096 01 46404195 46405574 Car01g02096 01 46404195 46405574 ECH