Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02095 ATGATGTTATCAGCTTCACCATCTTCTCTTGCAAGAAGCTCATTGGAAGAGATGCTTGATTCTCTTCGTCGGAGAGACGAAGAGGAGAAGCCTAAAGACCTACCTCCGGCATTGCCAGCTAGACCAACCTCTCGAGGTCGGTTGCCGCCGGCGAGAAGGTCATTGCCTAAAAGCTTTAAGGTTGATGGAGAAAATGAAAAGGTAATGGGGCATAGAAGGAGAGGTAGTTTTGGGAACAAGAAGTTGAGGTTAGATTTGGAATCTCCTTATGTGGCTATATCAGAAGAGAATGTTGTTGTTATTAGTGAACAATCTTCACCAGCTCCTGTTTCAATTCCTNNNNNNNNNNATTCTGAAGCTTCTGTTGCTTCTGTTGTTCCTCCTTCTTCTCCGGTATTGGAGGATGATAATGTTTCTTATTTCATCAAAAAGAAACTTCATGTTTGGTGTAGGCAACCAAGAGGAAAGTGGGGACTCGGAAGGATACAGTCAACTTCGGGAGAGCAAGCATCTGTTTCACTCTCAAATGGAAATGTTATGAACGTGGCACGGACAGAGCTTTTACCAGCTAACCCCGATATTTTAGAGGGTGTGGATGATCTTATACAGCTCAGCTATTTGAACGAACCCTCGGTTCTTCACAATCTTCAGTTTAGATATTCTCAAGATTTGATTTACAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCCTTCAAAGATGTAGAGATTTACGGAAACGAATATGTCTCCGCTTATAGGAAGAAATCTCTCGATAGTCCTCACGTTTATGCCATGGTAGATGCGGCTTATAATGAGATGATAGGAGAGGAAGTAAATCAATCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAAACGGAGACAGCAAAAATTGCGATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGATAGAAAATGAAGTTCTTCAGACAAATGTTGTACTAGAAGCTTTTGGCAATGCAAAAACGTCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATCGAAATTCATTTCAGCGCGACAGGGAAAATGTGTGGGGCTAAAATTCAAACGTTTCTATTAGAAAAGTCAAGAGTTGTTCAACTGGCTGATGGCGAGAGGTCATATCATGTATTTTATCAACTTTGCGCTGGATCTTCACCTGATCTTAAAGAGAGACTAAATCTTAGAGCCGCCAGCGAATATAAATATCTTAATCAGAGCAATTGCATGACAATTGACGGTGTTGACGATGCTAAAAAGTTTCATAAGCTGAAGAAAGCATTGGATGTCGTTCAAATGTGCATAGAGGATCAAGAGTGGGTCTTTAAGTTGCTCACTGCGATATTATGGCTGGGAAATATATCATTCCTTGAAAATGATAATGAAAATCATATTGAAGTGGTGAACGATGAAGCTGTAACCAGTGCTGCGTTGCTGATGGGTTGCAGTTCTCAGGAACTAATGACAGTATTATCTACGCATAAAATTCAAGCTGGCAAGGATACTATCACCAAAACATTGACATTGCGGCAGGCAATTGATGCAAGAGATGCATTAGCAAAATTCATCTATGCCAATTTGTTTGACTGGCTTTTAGAACAAGTTAACAAGTCACTTGAAGTTGGTAAACGACGTACAGGGAGATCCATAAGTATCCTTGATATTTACGGATTCGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGCATAAATTATGCTAATGAGAGGCTTCAACAACATTTCAATCGGCATCTTTTTAAACTGGAGCAGCAGGACTACGAAATAGATGGTGTTGATTGGACCAAAGTTGATTTCGAGGACAATCAAGAGTGTTTGGATCTCTATGAGAAGAAGCCTCTTGGGCTACTGTCTCTGTTGGACGAGGAATCGAATTTCCCGAGGGCCACTGATCTAACACTTGCCAACAAACTGAGGCAGCACCTGCAGTCTAATTCTTGCTTTAAAGGGGAATGGGGAAGGGGTTTCAGTGTTAGTCATTATGCAGGAGAGGTTATGTACGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCAATGCCATCTGATTCCATTCAACTACTGTCATCGTGTAGTTGTGAACTGCTACGTTCGTTTACCAAGACGCTTAACCAGTCTCAGAAGCAATCAAATTCCCCTCACTTAGGTGCTCTTGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTATTCAAGTTGATGAATCAGCTGGAGAGCACGACACCCCACTTTATTCGATGTATAAAGCCGAATGCCAAGCAACTTCCGGGCATATATGATGAAGAGCTTGTTCTCCAACAGCTCAAGTGTTGTGGGGTTTTGGAGGTTGTTAGGATTTCGAGGGCCGGATATCCTACTCGAATGACACATCAAGAGTTTGCCAGAAGGTACGAATTTTTGCTCTACGAGGCCAACACGTCTCAAGATCCATTGAGCGTCTCAGTTGCGGTTTTGCAACAATTTAATATCCCTCCTGAGATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTTGGTGCATTGGAGGATAAGAGAAAACAAGTTTTGCAGGGAGTACTCGGGGTTCAAAAATGCGTTCGTGGTCATCAAGCTCGCAGTCAATACAATAAACTTAAGAATGCAGTGACAACTTTACAATCATTTGTTCGTGGAGAAATTGCGAGAAGTAAATACGGAGTTATGGTGAAGTCTTCTATAACTATTTCTACTGAAAATATTGAAGAGATACAGGCTATCATAATACTACAATCTGTAATTCGCGGGTGGTTGGTTAGAATGCATTATAGTAGCTTGAATAAGTTTAAAAAGCATCCCGAGAATGCAAAATCTAGGCGAAGATCACGTTCGAAGATACCGGAAGTCAAGGACGCATCCAAAGATCGGGTCCCAAATCTACCCTCGGCTTTAGCAGAACTCCAAAGGCGGGTTGTCAAGGCCGAAGCAACTATAGAGCAAAAAGAAGAGGAAAATGCGGAGTTGAGGGAACAGCTAAAACAATTTGAGAAAAGGTGGATTGAATATGAGACAAAGATGAAAACAATGGAGGAAATGTGGCAAAGACAAATGTCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAACCAGCCTTGCATCTGAGAATGCCACTGGTCAACCTGTAAGACATGATATTACAGCATCGCCTTTAGGTTATGATTCTGAGGACACAATGTCGATGGGATCTCGAACGCCTCGAACACCCGGTTGCGGCACGCCATTCAAGTATTCTGGTAGTCTTGCTGAAGCCAGAGCAGGGAGAGAGGGCAACGGTTCTTTGAACAATCTAATGAAGGAGTTCGAGCAGCGTAGACAGACATTCGACAACAACGCAAGAGCTTTGGTCGAAGTTAAAACGACAGGACAATCCGCAAATACGAATTCCATTGAGGAACTTCACAATCTCAAACATAGGTTCGAAGGGTGGAAAAAAGAATACAAAACTAGGTTACGGGAGACAAAAGCGAGACTGAAATTAGGGCATTCGGAAATGGATAGAAATCGGCGAAAATGGTGGGGGAAATTGAGTTCTAGAGCACTATAA 3618 0.4201 MMLSASPSSLARSSLEEMLDSLRRRDEEEKPKDLPPALPARPTSRGRLPPARRSLPKSFKVDGENEKVMGHRRRGSFGNKKLRLDLESPYVAISEENVVVISEQSSPAPVSIPXXXXSEASVASVVPPSSPVLEDDNVSYFIKKKLHVWCRQPRGKWGLGRIQSTSGEQASVSLSNGNVMNVARTELLPANPDILEGVDDLIQLSYLNEPSVLHNLQFRYSQDLIYSKAGPILIALNPFKDVEIYGNEYVSAYRKKSLDSPHVYAMVDAAYNEMIGEEVNQSIIISGESGSGKTETAKIAMQYLAALGGGSCGIENEVLQTNVVLEAFGNAKTSRNDNSSRFGKLIEIHFSATGKMCGAKIQTFLLEKSRVVQLADGERSYHVFYQLCAGSSPDLKERLNLRAASEYKYLNQSNCMTIDGVDDAKKFHKLKKALDVVQMCIEDQEWVFKLLTAILWLGNISFLENDNENHIEVVNDEAVTSAALLMGCSSQELMTVLSTHKIQAGKDTITKTLTLRQAIDARDALAKFIYANLFDWLLEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQQDYEIDGVDWTKVDFEDNQECLDLYEKKPLGLLSLLDEESNFPRATDLTLANKLRQHLQSNSCFKGEWGRGFSVSHYAGEVMYDTNGFLEKNRDPMPSDSIQLLSSCSCELLRSFTKTLNQSQKQSNSPHLGALDSQKQSVGTKFKGQLFKLMNQLESTTPHFIRCIKPNAKQLPGIYDEELVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYEFLLYEANTSQDPLSVSVAVLQQFNIPPEMYQVGFTKLYLRTGQVGALEDKRKQVLQGVLGVQKCVRGHQARSQYNKLKNAVTTLQSFVRGEIARSKYGVMVKSSITISTENIEEIQAIIILQSVIRGWLVRMHYSSLNKFKKHPENAKSRRRSRSKIPEVKDASKDRVPNLPSALAELQRRVVKAEATIEQKEEENAELREQLKQFEKRWIEYETKMKTMEEMWQRQMSSLQMSLAAARTSLASENATGQPVRHDITASPLGYDSEDTMSMGSRTPRTPGCGTPFKYSGSLAEARAGREGNGSLNNLMKEFEQRRQTFDNNARALVEVKTTGQSANTNSIEELHNLKHRFEGWKKEYKTRLRETKARLKLGHSEMDRNRRKWWGKLSSRAL 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02095 1205 PANTHER MYOSIN 56 1203 - -
Car01g02095 1205 Gene3D Kinesin motor domain 195 799 IPR036961 -
Car01g02095 1205 PRINTS Myosin heavy chain signature 226 245 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 PRINTS Myosin heavy chain signature 280 305 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 PRINTS Myosin heavy chain signature 323 350 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 PRINTS Myosin heavy chain signature 555 583 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 PRINTS Myosin heavy chain signature 608 636 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 ProSiteProfiles IQ motif profile. 891 920 IPR000048 GO:0005515
Car01g02095 1205 Coils Coil 989 1030 - -
Car01g02095 1205 CDD MYSc_Myo8 210 854 IPR036022 -
Car01g02095 1205 SMART MYSc_2a 190 867 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 MobiDBLite consensus disorder prediction 57 73 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 955 985 - -
Car01g02095 1205 ProSiteProfiles IQ motif profile. 928 957 IPR000048 GO:0005515
Car01g02095 1205 Gene3D - 800 867 - -
Car01g02095 1205 Gene3D - 872 917 - -
Car01g02095 1205 Gene3D - 567 756 - -
Car01g02095 1205 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 143 192 IPR004009 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 ProSiteProfiles IQ motif profile. 870 897 IPR000048 GO:0005515
Car01g02095 1205 Pfam IQ calmodulin-binding motif 930 948 IPR000048 GO:0005515
Car01g02095 1205 Pfam IQ calmodulin-binding motif 893 911 IPR000048 GO:0005515
Car01g02095 1205 Gene3D Myosin VI head, motor domain, U50 subdomain 436 544 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 1 15 - -
Car01g02095 1205 ProSiteProfiles Myosin motor domain profile. 196 866 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 MobiDBLite consensus disorder prediction 1066 1100 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 17 35 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 965 980 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 1 73 - -
Car01g02095 1205 Pfam Myosin head (motor domain) 198 854 IPR001609 GO:0003774|GO:0005524|GO:0016459
Car01g02095 1205 SMART iq_5 867 889 IPR000048 GO:0005515
Car01g02095 1205 SMART iq_5 927 949 IPR000048 GO:0005515
Car01g02095 1205 SMART iq_5 890 912 IPR000048 GO:0005515
Car01g02095 1205 Gene3D - 379 435 - -
Car01g02095 1205 MobiDBLite consensus disorder prediction 1077 1091 - -
Car01g02095 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 169 917 IPR027417 -
Car01g02095 1205 PANTHER MYOSIN-2 ISOFORM X1 56 1203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02095 Car-Chr1 46393799 46403866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02095 1 1199 Myosins gene family AT5G54280 63.023 0.0 1554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02095 K10357 - gmx:100819335 1902.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02095 01 46393799 46403866 Car01g02095 01 46393799 46403866 ECH