Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02086 ATGGTGATTGTGAAAGTGAAACttgttttggttgttgttgccgttgttattgCATTTTTTATAAATGCTTCATTTGCATTATACACTCCACATGATAATTATCTAATTGCTTGTGGTTCTTCAAAAAGTATCAACTTTCAAGATCGTGTTTTTGTTCCTGATTCACAACATTCTACACTAGTGTTGAAAACTGGAAATTCTATTGGCGTTGTTGCTAATTCCAATTCTTCAAGTAGTGTTCCATCACCAATTTATCAATCAGCTAGGATTTTCACTGAAAAGGGTTCTTATAGATTTGAAGTTCAACAAGGTAGACATTGGGTTAGGCTTTATTTTTATCCTGTTTCAAACTCTATCCATAATTTGAGTTCAGCTTCTATAACTGTTGTTAGTGATGATTTTGTTCTATTGAGAAACTTCACTTTTAGGAACTATAGTGGTGGTTCTTATATGTTTAGAGAGTATGCTATTAATGTAACTTCTGATATTTTGACTGTAACCTTCATTCCTTCGAATGGTTCGGTTGCTTTTGTGAATGCAATTGAAGTTGTGTCTATGCCAGATGACTTGTTTGTCGATCAGGCATTGGCACTTAACCCAACATCCCCTTTTAACGGCCTTTCCGAACTCGCTTTCGAGACCGTTTACCGATTGAACATAGGAGGAACCTTGCTCACGGCCGAGAATGATACCTTGGGAAGGACTTGGGAGAATGATCAGAAGTATCTCCATGTGAACAGCTCGGTTACTAATGTGTCGGTCAGTCCTTCGAGCATTAGGTATCGACCGGGCGTTACGCCCGAGACAGCACCTAATGAGGTCTATGCCAGTGCTGAAGCAATGGGGGATGCAAATGTAGCCAATTCAATTTTCAACATTACTTGGGTTTTTATTGTTGATCCAGATTTCTCGTATTTTATACGGCTGCACTTTTGCGATATTATTAGCAACTCAATGAACAATTTGGTGTTCAATGTATTTATAAATACTGATATAGCTATTGGAAGCCTTGACCTTTCATCAATGACTAATGGTTTGGCTTTGCCTTACTATAAGGACTTTGTTTCTAATGCTTCATCGGACAACACTTTGACGGTTAGCGTCGGTCCTGATACAATGGCAGACATTACTAATGCAACTATGAATGGATTGGAGATAATGAAAATCAGCAATGGATTGAAGAGTTTGGATGGACTTTCTTCGGTCAATAGTCTGCTTCCTAGTTCATCATCGAACAAGAACAAGATAGGTATAATTGTTGGTTCCGCTGCCGGGGCTGTTGTTGCCTTAGCTCTTGTTGGTTTGTGTTATTGCTGCATTGTGAGAAACAAGTCAAAGTCTCCTCAACACGGACATTCATGGCTACCTTTGCCCTTATATGGAAATTCTCAGACAATGACTAAAATGTCAACAACTTCACAGAAGAGTGGAGCAAGTGGCATTTCTTTGGCGTCAACGAATCTCGGACGGTTCTTCACTTTCCAAGAAATCCTAGATGCAACCAACAAATTCGATGAGAAGCTTCTACTTGGTGTTGGTGGTTTTGGCAGGGTTTATCAGGGATCCCTTGATGATGGGACTGATGTAGCCGTCAAAAGGGGGAATCCTAGATCTGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAACTTCGTCATCGTCATCTTGTGTCACTAATCGGTTATTGTGATGAGAGGTCAGAAATGATTCTTGTCTATGAATACATGGCTAATGGTCCCCTGCGGAGTCATTTGTATGGAACAGACCTACCGCCTTTATCGTGGAAGCAGCGGCTCGAGATTTGCATCGGAGCAGCAAGAGGCCTTCATTATCTCCACACCGGTGCATCACAAAGCATAATTCATCGAGATGTGAAGACAACAaacattctcttagatgataactttgttgctaaagttgctgattttggcctctccaaaACTGGTCCTGCACTTGATCAGACTCATGTGAGCACTGCGGTTAAAGGTAGTTTTGGTTATCTTGATCCAGAATACTTTAGAAGGCAGCAACTCACAGAGAAATCGGATGTTTATTCATTCGGAGTAGTTTTAATGGAAGTGCTATGCACAAGACCAGCGTTGAACCCTGTCCTTCCGAGGGAACAGGTTAATATAGCCGAATGGGCGATGAACTGGCAAAAGAAAGGAATGCTTGATCAAATCATGGATCAACATCTGGTGGGAAAGGTCAATCCTGCTTCGCTTAAGAAGTTCGGGGAGACAGCCGAGAAGTGTTTGGCTGAGTATGGAGTCGATAGGCCATCGATGGGAGATGTTTTATGGAATCTTGAATATGCTTTGCAGCTCCAAGAGACTTCGTCAGCACTCATGGAACCCGAAGATAACAGCACGAACCACATTACCGGAATTCAGTTGACCCGTCTCGAGAATTTTGATAACAGTGTGAGTATGATTGACGGGAGCAACTCTGTCACAGATGATGATGCGGAAGACGCTGCTACAAGTGCAGTGTTCTCTCAATTGGTAAATCCACGCGGAAGATGA 2538 0.4023 MVIVKVKLVLVVVAVVIAFFINASFALYTPHDNYLIACGSSKSINFQDRVFVPDSQHSTLVLKTGNSIGVVANSNSSSSVPSPIYQSARIFTEKGSYRFEVQQGRHWVRLYFYPVSNSIHNLSSASITVVSDDFVLLRNFTFRNYSGGSYMFREYAINVTSDILTVTFIPSNGSVAFVNAIEVVSMPDDLFVDQALALNPTSPFNGLSELAFETVYRLNIGGTLLTAENDTLGRTWENDQKYLHVNSSVTNVSVSPSSIRYRPGVTPETAPNEVYASAEAMGDANVANSIFNITWVFIVDPDFSYFIRLHFCDIISNSMNNLVFNVFINTDIAIGSLDLSSMTNGLALPYYKDFVSNASSDNTLTVSVGPDTMADITNATMNGLEIMKISNGLKSLDGLSSVNSLLPSSSSNKNKIGIIVGSAAGAVVALALVGLCYCCIVRNKSKSPQHGHSWLPLPLYGNSQTMTKMSTTSQKSGASGISLASTNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYQGSLDDGTDVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDQHLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTRLENFDNSVSMIDGSNSVTDDDAEDAATSAVFSQLVNPRGR 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02086 845 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Car01g02086 845 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02086 845 Gene3D Transferase(Phosphotransferase) domain 1 580 799 - -
Car01g02086 845 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 20 838 - -
Car01g02086 845 Gene3D Phosphorylase Kinase; domain 1 462 579 - -
Car01g02086 845 CDD STKc_IRAK 510 775 - -
Car01g02086 845 PANTHER OS07G0166700 PROTEIN 20 838 IPR045272 GO:0004714|GO:0006468
Car01g02086 845 SMART serkin_6 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02086 845 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Car01g02086 845 Gene3D - 210 390 - -
Car01g02086 845 Gene3D - 33 187 - -
Car01g02086 845 Pfam Malectin-like domain 36 389 IPR024788 -
Car01g02086 845 SUPERFAMILY Protein kinase-like (PK-like) 483 775 IPR011009 -
Car01g02086 845 Pfam Protein tyrosine and serine/threonine kinase 509 770 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02086 Car-Chr1 46315569 46318836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02086 1 845 Receptor kinase-like Gene Family AT3G46290 51.459 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Car01g02086 Malectin_like 1.6e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02086 - - gmx:100809700 1313.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02086 01 46315569 46318836 Car01g02086 01 46315569 46318836 ECH