Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02084 ATGTCTACTAAGAGTGAACACCAAACGGTTCCTCTTTCGGTTTTTTTGAAACGTGAATTGATGATTGAGAAAATTGAGAAACCTGAGATTGTTCATGGTCAAGCTTTTCAAAGCAAGAAAGGAGAGGATTTCACCTTGCTAAAGACCGAGTGCCAGAGGATGATGGGTGATGGGGTCTATACTTATTCCGTTTTTGGGCTATTTGATGGGCACAGTGGATCTGCTGCTGCTATTTATTCTAAGGAGAATCTTCTGAACAATGTTTTAAGTGCAATTCCTCCAGATCTTAACAGAGATGAGTGGTTAGCAGCGTTGCCTAGAGCTTTGGTTGCAGGCTTTGTAAAAACTGATAAAGATTTTCAACAGAAAGGACAAAAATCAGGAACAACTGTTACCTTTGTCATTATCGAAGGATGGGTTGTAACAGTTGCATCAGTTGGCGATTCCCGTTGCGTACTAGAATCTTCTGAAGGTGGGATTTATTACTTGTCAGCAGATCATCGGCTAGAAACAAATGAAGAGGAGAGGGTTCGTATCACTTCTAGTGGGGGCGAGGTTGGCCGTTTAAATACAGGGGGAGGAGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGCCTTTCACGATCTATCGGAGATATGGATATTGGTGAATTTGTTGTCCCTGTACCATATGTAAAACAAGTGAAGCTGTCCACTGGTGGAGGTCGGCTTGTTATCTGCAGTGATGGTGTTTGGGATGCTTTACCTGCAGAAGTGGCCCTTGATTGTTGCCGTGGCATGTCAGCGGAGTCTGCTGCACCACTGATTGTAAAAGAAGCTTTACAAGCAAAGGGGCTTAGAGATGATACAACCTGTATCGTTGTTGATATATTACCTCAGGAGAAGCCACCTGCTCCTGTGCCACATCAAAAGAAGCCAGCAGTAAAAGGAATGCTCAAGGCAATGTTTCGTAAAAAGACTTCTGAATCATCTTATATTGACAAAGAATACTTGGAGCCAGATGTAGTAGTGGAGCTGTATGAGGAAGGCTCTGCTATGCTCTCAGAGAGGTTGGATACAAAATATCCACTCTGCAACATGTTCAAGTTGTTCATATGTGCAGTATGTCAAGTAGAAATAAAACCCGGAGAGGGTATTTCAGTACACGAGGGTGCATCCAACCCTCGAAAATTGCGCCCTTGGGATGGACCTTTCCTTTGCTTTAGTTGCCGGGAGAAGAAAGAAGCCATGGAAGGGAAAAGATCTCTAGATAGACTTAGCAGCGGAAGTGACGAATGA 1287 0.439 MSTKSEHQTVPLSVFLKRELMIEKIEKPEIVHGQAFQSKKGEDFTLLKTECQRMMGDGVYTYSVFGLFDGHSGSAAAIYSKENLLNNVLSAIPPDLNRDEWLAALPRALVAGFVKTDKDFQQKGQKSGTTVTFVIIEGWVVTVASVGDSRCVLESSEGGIYYLSADHRLETNEEERVRITSSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDIGEFVVPVPYVKQVKLSTGGGRLVICSDGVWDALPAEVALDCCRGMSAESAAPLIVKEALQAKGLRDDTTCIVVDILPQEKPPAPVPHQKKPAVKGMLKAMFRKKTSESSYIDKEYLEPDVVVELYEEGSAMLSERLDTKYPLCNMFKLFICAVCQVEIKPGEGISVHEGASNPRKLRPWDGPFLCFSCREKKEAMEGKRSLDRLSSGSDE 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02084 428 PANTHER ALPHABET, ISOFORM E-RELATED 2 422 - -
Car01g02084 428 CDD PP2Cc 39 293 IPR001932 -
Car01g02084 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 422 - -
Car01g02084 428 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Car01g02084 428 Pfam Protein phosphatase 2C 57 279 IPR001932 -
Car01g02084 428 SMART PP2C_SIG_2 46 293 IPR001932 -
Car01g02084 428 ProSiteProfiles PPM-type phosphatase domain profile. 33 293 IPR001932 -
Car01g02084 428 Gene3D - 32 299 IPR036457 -
Car01g02084 428 SMART PP2C_4 21 291 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02084 Car-Chr1 46292116 46297627 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02084 1 427 PP2C-type Phosphatase Gene Family AT1G47380 78.322 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02084 - - gmx:100778367 766.918