Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02079 ATGGAAAGTACTGATTCATCCACCGGTTCGCAACAACCGAATCTCCCGCCTGGATTCCGATTCCACCCCACCGATGAAGAGCTTGTTGTTCATTACCTCAAGAAAAAAGCAGCTTCAGCTCCTTTGCCTGTAGCCATCATCGCTGAAGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAACGTTCGGAGAGCAAGAGTGGTATTTCTTTAGTCCAAGGGACAGGAAGTATCCTAATGGTGCTAGGCCAAACAGGGCTGCTACATCTGGTTATTGGAAGGCAACTGGTACTGATAAGCCCGTTTTGACTTCAGGTGGAACACAAAAAGTTGGTGTGAAAAAAGCTTTGGTTTTCTATGGTGGAAAACCACCAAGAGGGATTAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAATAAGCCTAATAATAGGCCTCCTGGTTGTGACTTGGGCAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGTTATGCCGAATCTACAAGAAAAGCAACACACATTGGTCACCTGTGGAACATGATAGAGAAGATTCAATGGATGATATGATAGGAGGAGTACCTCCATCAATAAACGTGGGACAAATGAATGCAAGGTTTCATTTTTCAAAGATGTCAAATAGCTACAACAATACATTGTTGGAAAATGACCAAAATTTATTAGAAGGAATGATGCTAAGCAATAACAACAACAATAACAATACCGTTGCTACTTTGTCATCACAATTAGGAGGTTCTGCTTCTACTTCCAATGCTTCTGCTTCAAAAAGAACACTCTCTTCACTTTATTGGAATGATCATGAAGATGTTGCAGCTTCTAATAAAAGGTTCAATTTGGAAAGTGATCATCATCATGGAAGTGTTGTGAGAAATGATCAAGAAAGCGGAACCGTCGCTACATCTTTCGCTTCTCTCCTTAATAATCTCCCTCAAACACCTAATTCATTGCATCAACAAACAATGTTGGGATCAATAGGTGATGGTTTACTTAGAACAACACCATATCAAATTCAAGGCATGAATTGGTATGGTTAA 1071 0.4062 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHWSPVEHDREDSMDDMIGGVPPSINVGQMNARFHFSKMSNSYNNTLLENDQNLLEGMMLSNNNNNNNTVATLSSQLGGSASTSNASASKRTLSSLYWNDHEDVAASNKRFNLESDHHHGSVVRNDQESGTVATSFASLLNNLPQTPNSLHQQTMLGSIGDGLLRTTPYQIQGMNWYG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02079 356 MobiDBLite consensus disorder prediction 1 20 - -
Car01g02079 356 MobiDBLite consensus disorder prediction 244 264 - -
Car01g02079 356 PANTHER NAC TRANSCRIPTION FACTOR 56 1 330 - -
Car01g02079 356 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Car01g02079 356 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Car01g02079 356 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Car01g02079 356 MobiDBLite consensus disorder prediction 1 17 - -
Car01g02079 356 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Car01g02079 356 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02079 Car-Chr1 46233674 46235885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02079 1 355 NAC Transcription Factor Family AT3G15510 53.403 6.36e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car01g02079 NAM 1.1e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02079 - - gmx:100170710 560.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02079 01 46233674 46235885 Car01g02079 01 46233674 46235885 ECH