Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02077 ATGGAACAAGATATGGAAGATATTGAGTGTCAAACAATTTATAAAGAGACATTGGAGGAAGAACCACCTGCTGATATCTTGCACAATAGAAAACGTCCCGTAATTCTTAAGTTTGATGATGTTGTGTACAAAATAAAGGCAAATAAAGGTGGACTATTTAAGAAAAACAAAAAAGTAGAAGAGAAAGTGATCCTAAAAGGAGTAACAGGAATTGTTAAACCAGGTGAAATGCTAGCAATGTTAGGTCCATCAGGAAGTGGAAAAACAACTTTGTTAACAGCATTAGGTGGAAGACTTGGTGGAAAACTTTATGGAAACATAACATACAATGGAAAAACCTTTTCAAATGTTATAAAAAGAAACACAGGTTTTGTCACACAAGATGATGTTCTTTACCCTCACTTAACAGTAACTGAAACACTTGTGTTCACAGCACTTCTTAGATTACCAAACAGTGTCACAAAAGATGAAAAAGTTTTGCATGCTAAAAATGTTATTGACCAACTTGGTTTAACAAAGTGCAAAGATAGCATTGTTGGAAGTGCTTATTTGAGAGGTGTTTCTGGTGGAGAGAGGAAAAGGGTTAGTATTGGACAAGAATTGCTTATAAATCCTAGTTTGTTGTTTCTTGATGAACCAACTTCTGGTTTAGATTCAACTACTGCACAGAGAATTGTGTCAACTTTGTGGGATTTAGCTAGTGGTGGAAGGACTATTGTGATGACTATACATCAACCTTCAAGTAGGTTATATTATATGTTTCATAAAGTTTTGTTGCTTGCTGAAGGAAATCCTTTGTTTTTTGGTAAAGGGTCTGATGCTATTGAATACTTTTCAAATATTGGTTATTCTCCTGCTATGGCTATGAACCCTTCTGACTTCCTTTTGGATCTTGCAAATGGTATTTACACTGATGACATGAATCAAGACCATACCGTAGACAAACAAAAATTGATTTCAGCATTTAAGAGCAACTATGATGCACAGTTAAAGCCAGAACAAGAAGAAATCAATGACTCTGATTTAAGTGAGGGTAAATTTCAAGAAACAGGTTCTGGAAAATGGCCTACAAGCTGGTCACAGCAATTCTTTGTACTTTTAAGAAGAGATGTGAAAGAGAGAAAGTATGAATCATTCTCTGGCCTAAGGATTGCTCAGATCCTTGTGGTTGCACTTATTGCAGGACTACTTTGGTATAAATCTAATCTTTCACACTTGCAGGATCAGATAGGACTTCTATTCTTCATAACAGGCTTTTGGGGTTTCTTCCCTCTCTTCCAAGCAATCTTCACCTTCCCTCAAGAACTAATGATGCTAGAAAAAGAAAGATCCTCAGGAATGTACAGACTCTCATCCTACTTCATTTCAAGAATGGTAGCTGACCTACCAATGGAACTAGTCCTCCCTACAATCTTCATTCTCATAACATATTTTATGACAGGTCTCAAAGCAACAGTGATAAACTTCTTTCAAACACTTTTCACCCTCTTACTCAATGTGTTAGTTGCACAAGGACTAGGACTTGCACTTGGTGCTCTTGTGCTTGATCAAAAATCAGCTACAACACTTGCATCAGTCATCATGCTATGTTTCTTACTTGCTGGTGGATTTTATGTTCAAAATGTTCCAAAGTTTATATCTTGGGTTAAGTATATATCTATTAGCTACTACACTTATCAACTATTTCTTGGGTCACAATATCATAGTGGTGACACATACCCTTGTTCTAATGGTCACTGTCCTATTGAAGAGTTTCCTCCTATAAAGCAAATGGGGTTTCAATTGAATGGTGAAGGTTTGGCTGCATTGGCTCTTGTTTTAATGTTAATTGGTTATAGACTTATTGCTTATTTTGCTCTTATGAGGATTGGAGTCACTAAGAAATTGGCCTAG 1893 0.3619 MEQDMEDIECQTIYKETLEEEPPADILHNRKRPVILKFDDVVYKIKANKGGLFKKNKKVEEKVILKGVTGIVKPGEMLAMLGPSGSGKTTLLTALGGRLGGKLYGNITYNGKTFSNVIKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKDEKVLHAKNVIDQLGLTKCKDSIVGSAYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLASGGRTIVMTIHQPSSRLYYMFHKVLLLAEGNPLFFGKGSDAIEYFSNIGYSPAMAMNPSDFLLDLANGIYTDDMNQDHTVDKQKLISAFKSNYDAQLKPEQEEINDSDLSEGKFQETGSGKWPTSWSQQFFVLLRRDVKERKYESFSGLRIAQILVVALIAGLLWYKSNLSHLQDQIGLLFFITGFWGFFPLFQAIFTFPQELMMLEKERSSGMYRLSSYFISRMVADLPMELVLPTIFILITYFMTGLKATVINFFQTLFTLLLNVLVAQGLGLALGALVLDQKSATTLASVIMLCFLLAGGFYVQNVPKFISWVKYISISYYTYQLFLGSQYHSGDTYPCSNGHCPIEEFPPIKQMGFQLNGEGLAALALVLMLIGYRLIAYFALMRIGVTKKLA 630
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car01g02077 630 Pfam ABC transporter 65 215 IPR003439 GO:0005524
Car01g02077 630 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 279 IPR027417 -
Car01g02077 630 Pfam ABC-2 type transporter 361 567 IPR013525 GO:0016020|GO:0140359
Car01g02077 630 SMART AAA_5 74 282 IPR003593 -
Car01g02077 630 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 287 IPR003439 GO:0005524
Car01g02077 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 24 624 - -
Car01g02077 630 CDD ABCG_EPDR 33 269 - -
Car01g02077 630 Pfam ABC-2 type transporter 244 351 IPR043926 GO:0140359
Car01g02077 630 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 24 624 - -
Car01g02077 630 Gene3D - 54 281 IPR027417 -
Car01g02077 630 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car01g02077 Car-Chr1 46167297 46171935 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02077 72 248 Calmodulin-binding Proteins AT2G36910 29.189 5.65e-12 67.4
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02077 K05681 - gmx:100816135 936.406
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02077 01 46167297 46171935 Car01g02077 01 46167297 46171935 ECH