Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02058 ATGGACAAGAAATCACTAGCTGGCTTGTGCTTCCTCTTCCTCGTTCTCTTTGTTGCACAAGAAATAGCGGTGAGTGAAGCAGCGAGGTGTGAGAATTTGGCTGATACATACAGGGGACCATGTTTCACAACTGGTAGCTGTGATGATCACTGTAAGAACAAAGAGCATTTAGTTAGCGGCAGATGCAGGGATGACTTTCGTTGTTGGTGCACTCGTAACTGCTAA 225 0.4578 MDKKSLAGLCFLFLVLFVAQEIAVSEAARCENLADTYRGPCFTTGSCDDHCKNKEHLVSGRCRDDFRCWCTRNC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02058 74 PANTHER DEFENSIN 1 74 - -
Car01g02058 74 PANTHER DEFENSIN-LIKE PROTEIN 1 1 74 - -
Car01g02058 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Car01g02058 74 SMART gth_4 29 74 IPR003614 GO:0006952
Car01g02058 74 Pfam Gamma-thionin family 30 74 - -
Car01g02058 74 Gene3D - 29 74 IPR036574 -
Car01g02058 74 SUPERFAMILY Scorpion toxin-like 29 74 IPR036574 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02058 7 74 Plant Defensins Gene Families AT1G61070 34.783 2.54e-08 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02058 - - gmx:100779239 147.132