Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02042 atggccgtgcatgaaggggttgtatctgtctttcccaatgaaaaaaaacaagtcctcacaacaaaatcttgggactttattggttttccaataaatgtggagagagcacaaccagagagtgacattattattggagtaatcgatcatgggatttggccggagtctcagagtttcaatgatataggattgagctcacctcctagcagatggaagggaccctgccaagcttttgatttccactgcaacaataaaataattggagctagatattataaaagtaaaattgataaagacttgagcgtatctccaagagacacaaatgggcatggaacccatatagcttcaatagcagctggaaaccctgttagcatggccagtccaaatcacgcatcagtaatgaatgtcgcaccttgggcaatttctgtggctgcaagcactttggatagaaaatttgttacccaagtcaaattagggaataacaaattttttgagggtacctctctgaataattttgatctaaagggagaattgtatcctcttatctattccagagatgcaccgaataaggaagcaggcttcgatggagattcatctagaaattgccccttcaattcgttggatgaaaaattggtgaaaggaaaaattgttctatgcgaaggaaataaagcggcctcagaggcatttagagtagctctaatgacaacagcgaagcagatgagtcccacttataatcaagatgcagaatttgcttacggagcaggccaaattgaccctgttaaggctgtgaatcccggcttgAAGAAAAATGCAGCAAGCAAGCAAGAAACTTGTCCATGTTGCAGTATCGAAGGCAAGAAAATAGtgtcgtcgtcgcgctgtcatctattgtcgattctcaatTTCAAGCAAACTAAAAAGGACATAATAGCAACATCAAATGGAGAACAATTGGTTCGAAGTTCCTATTTTGGTCATTCATTGGACCTAGTCTCCTGTATCCTGGTGAATTTTGATAAACAACAAATCGTAGTTTGGAGGGGGAAGGATTATAAGCAATTGAAAGGGTCGGAAATCAACAAATTTGAGGGCAACAACATGGACGACAACATGGATATCTAG 1119 0.0965 MAVHEGVVSVFPNEKKQVLTTKSWDFIGFPINVERAQPESDIIIGVIDHGIWPESQSFNDIGLSSPPSRWKGPCQAFDFHCNNKIIGARYYKSKIDKDLSVSPRDTNGHGTHIASIAAGNPVSMASPNHASVMNVAPWAISVAASTLDRKFVTQVKLGNNKFFEGTSLNNFDLKGELYPLIYSRDAPNKEAGFDGDSSRNCPFNSLDEKLVKGKIVLCEGNKAASEAFRVALMTTAKQMSPTYNQDAEFAYGAGQIDPVKAVNPGLKKNAASKQETCPCCSIEGKKIVSSSRCHLLSILNFKQTKKDIIATSNGEQLVRSSYFGHSLDLVSCILVNFDKQQIVVWRGKDYKQLKGSEINKFEGNNMDDNMDI 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02042 372 Coils Coil 372 372 - -
Car01g02042 372 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 125 IPR045051 -
Car01g02042 372 Gene3D - 148 226 - -
Car01g02042 372 Gene3D Peptidase S8/S53 domain 227 267 IPR036852 GO:0004252|GO:0006508
Car01g02042 372 Gene3D Peptidase S8/S53 domain 41 127 IPR036852 GO:0004252|GO:0006508
Car01g02042 372 Gene3D Peptidase S8/S53 domain 128 147 IPR036852 GO:0004252|GO:0006508
Car01g02042 372 CDD PA_subtilisin_like 155 238 - -
Car01g02042 372 Pfam Subtilase family 40 132 IPR000209 GO:0006508|GO:0008236
Car01g02042 372 PANTHER PUTATIVE-RELATED 223 271 - -
Car01g02042 372 ProSitePatterns Serine proteases, subtilase family, histidine active site. 109 119 IPR022398 -
Car01g02042 372 PANTHER PUTATIVE-RELATED 125 224 - -
Car01g02042 372 PANTHER PUTATIVE-RELATED 3 125 - -
Car01g02042 372 SUPERFAMILY Subtilisin-like 25 263 IPR036852 GO:0004252|GO:0006508
Car01g02042 372 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 125 224 IPR045051 -
Car01g02042 372 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 223 271 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02042 Car-Chr1 45724386 45735090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02042 227 266 Subtilisin-like Serine Gene Family AT5G59190 55.000 2.15e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02042 - - cam:101508701 265.388