Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02034 ATGAAGCTTCATAAACATATTTTTCTCTTCTTGTTTCTCTTTATTAGTTTAATTTCAAGTTCCCAAGCCTATACATTTTATGCTGGTGGAAAAGATGGGTGGGTTTTGAACCCGTATGAAAATTACAATCAATGGTCAGGGAAGAATAGGTTCCAAGTCAATGATATTCTTGTTTTTAAGTACAAGAAGGACTCAAATTCAGTGTTGGTTGTGAACAAGGAGGATTATGATAAGTGCAACAAGAAGAATCCAATCAAAAAATTTGAGGATGGTGACTCTAAGTTTCAATTTGATAGATCTGGTCCTTTTTACTTCATTAGTGGAAAAGATGATAATTGTGAAAAGGGTCAGAAAATTATTGTTGTGGTGATGGCTGTGAGAAAAAATACTCCTTCTCCTTATGTTCCAATAACACCTCCAAAAACACCTTCTCCTAGTTATAGTCCTCCCTATGTTCCTACACCTCCAAAAACTCCTTCACCTATTTACAATCCTCCTAATGTTCCTTATACACCTCCAAAAGCTCCATCTCCAAATCAACCACCACCACATGTACCAATTACACCACCAAAAACATCTCCTAATTATAGTCCTCCCAATATTCCTTATACACCCCCCAAAAGTACTCCTCCTACCAATCAACCTCCCTATGTTCCTACACCTCCAAAAACTCCTTCTCCCATTCACAATCCTCCAAAAGCTCCATCTCCCAATCAACCACCTTATGTACCAATTACACCACCAAAATCACCTTCTCCTACTTATAGTCCTCCCAATACTCCTTATACACCCCCCAAAATTACACCTCCTACTTATGTACCAATTACACCACCAAAAACACCTTCTCCTACTCATAGTCCTCCCAACACTCCTTATACACCTCCAAAAAGTACACCTCCTAAAACTCCTTCTCCCATTTACAATCCACCTAATGTTCCATACACACCCCCCAAAGCTCATTCTCCTAGCAATCAACCACCATATGCACCAATTTCACCACCAAAAACTCCTTCTCCTATCCACAATCCTCCTAATGTTCCTTACACTCCCCCAAAAACTCCTTCCCCTAGCAATGAACCACCATATGTATCAACTCCTCCAAAAGCACATTCTCCTACTTACAATCCTCCTAATGTTCCTTACACTCCTCCAAAATCTCCTTCCCCTAGTAACCAACCACCATATGTACCAATTACACCTCCAAAAGCCCCTTCTCCTACTCACAGTAGTCCACCCAACACTCCTCCTACTTATAATCCCCCTAGTGGTCCTTATACTCCACCAAAAGCTCCTTCCCCTAGTAATCAACCACCATATGTACCAATTACACCTCCAAAAACCCCTTCTCCTACTCACAATAGTCCACCCAACACTCCTTCTCCTACTTATAATCCCCCTAATGTTCCTTATACTCCCCCAAAAGCTCCTTCCCCTAGCAATCAACCACCAACTCCTCCAAAAACCCCTTCTCCTATCTCTCAACCACCATATGTCCCAATTACACCACCAAAATCTCCTTCTCCTATTACCAATCCTCCTAATATCCCTTACACACCCTCTCCTATTTCTCAACCTCCATATATTCCAACACCTCCAAAAAAACCTTCTCCCATTTCCCAACCGCCTTCTATTCCTAAAACCCCTTCACCCATTTCTCAAGCCCCTTATATTTCAACACCTCCAAACACTCATTCCCCAACATCACAACCACCTTACATTAATCCAACACCTCCAAACACTAATTCCCCAAAATCACAACCACCTTATATTAATCCAACACCTCCAAAAACTCCTTCACCATCTTCTCAAACACCTCAAGGTGCCCCTTCACCAAATTCCCAACCTCCATATATACAAACACCACCAAACACACATTCACCAACATCTCAACCACCTTACATTCAAACACCACCATCAACCTCTTCTCCATCATCTTCACAATCACCCCTTCTTCCAACTCCTCCAAAATCCTCTCAACCTCCAATAACAGCACAAACACCCTATCCAAATGGAATAGctccatctccactatctccatatccatccaacaactcaacatcaccttcacctccgaccccatctccGGCGAGTTCTCCGGTATCGACCATTACACCAGTACCATCTCCTTCGGGGTCCCTTCCGGCAGCTGCAACTCCATCTCCGTCGTCCACCACCCCAGGAACATTGTCACCGTCGTCCACCACCCCAGGATCGCCGTCGGCATCGAATGAAACGACACCGGGAAAGACAGGCGGAGTGTCATCTGCAACTCCGCCGGGGGTATGGGCTTACGCCATTACAATTTTGGTCGGTGCTGCACTTACGACTATTCTTGGATAG 2340 0.4209 MKLHKHIFLFLFLFISLISSSQAYTFYAGGKDGWVLNPYENYNQWSGKNRFQVNDILVFKYKKDSNSVLVVNKEDYDKCNKKNPIKKFEDGDSKFQFDRSGPFYFISGKDDNCEKGQKIIVVVMAVRKNTPSPYVPITPPKTPSPSYSPPYVPTPPKTPSPIYNPPNVPYTPPKAPSPNQPPPHVPITPPKTSPNYSPPNIPYTPPKSTPPTNQPPYVPTPPKTPSPIHNPPKAPSPNQPPYVPITPPKSPSPTYSPPNTPYTPPKITPPTYVPITPPKTPSPTHSPPNTPYTPPKSTPPKTPSPIYNPPNVPYTPPKAHSPSNQPPYAPISPPKTPSPIHNPPNVPYTPPKTPSPSNEPPYVSTPPKAHSPTYNPPNVPYTPPKSPSPSNQPPYVPITPPKAPSPTHSSPPNTPPTYNPPSGPYTPPKAPSPSNQPPYVPITPPKTPSPTHNSPPNTPSPTYNPPNVPYTPPKAPSPSNQPPTPPKTPSPISQPPYVPITPPKSPSPITNPPNIPYTPSPISQPPYIPTPPKKPSPISQPPSIPKTPSPISQAPYISTPPNTHSPTSQPPYINPTPPNTNSPKSQPPYINPTPPKTPSPSSQTPQGAPSPNSQPPYIQTPPNTHSPTSQPPYIQTPPSTSSPSSSQSPLLPTPPKSSQPPITAQTPYPNGIAPSPLSPYPSNNSTSPSPPTPSPASSPVSTITPVPSPSGSLPAAATPSPSSTTPGTLSPSSTTPGSPSASNETTPGKTGGVSSATPPGVWAYAITILVGAALTTILG 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02034 779 PANTHER EARLY NODULIN-LIKE PROTEIN 2 1 305 - -
Car01g02034 779 MobiDBLite consensus disorder prediction 648 662 - -
Car01g02034 779 PANTHER BLUE COPPER PROTEIN 1 305 IPR039391 GO:0009055
Car01g02034 779 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Car01g02034 779 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Car01g02034 779 CDD OsENODL1_like 24 124 IPR041846 -
Car01g02034 779 MobiDBLite consensus disorder prediction 133 549 - -
Car01g02034 779 MobiDBLite consensus disorder prediction 703 753 - -
Car01g02034 779 MobiDBLite consensus disorder prediction 672 702 - -
Car01g02034 779 MobiDBLite consensus disorder prediction 131 758 - -
Car01g02034 779 Gene3D - 22 128 IPR008972 -
Car01g02034 779 MobiDBLite consensus disorder prediction 564 638 - -
Car01g02034 779 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02034 Car-Chr1 45621370 45624326 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02034 8 182 Phytocyanin Superfamily AT5G53870 52.571 1.92e-53 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02034 - - cam:101495711 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02034 01 45621370 45624326 Car01g02034 01 45621370 45624326 ECH