Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02030 ATGGAGAATTTGGAAACATTGGATTTATCTTACAATGATCTCTCTGGAACAATCCCTCCTTCATTTAACAACCTCACATTCTTGTCAAAGTTTAGTGTGGCGCATAATCGCTTGCAAGGACCTATTCCAAGTGGAGGGCAGTTTTTAAGCTTCCCTAGTTCAAGTTTTGAGGGAAATTTGGGGCTTTGCAGGGATATTGATATTGATACTGATATTCGTTGTAAAAAGTTTAACGAAGCAAGGCCGAATTTGGCGTCTGGTTCATCGAGAAAATTTAGTAGAAGCAGTGTACTTGGCATTACAATCAGCATAGGGGTAGGGCTTGCTTTGTTGCTTGCAGTTATTCTGTTAAGAATGTCAAAGAGGGAAGAAGATAAACCTAATGATAACTTTGATGAGGAGATGAACGGTAGTAGGCCACGGAGGTTATCGGGAGCACTTGTTTCGTCGAAATTGGTGCTTTTTCAGAATTCGGATTGTAAGGATCTCTCAGTTGCTGATTTGTTAAAAGCCACAAACAATTTCAACCAGGCGAATATTGTTGGTTGTGGCGGCTTTGGTCTTGTCTACAAGGCGTATCTTCCGAACGGAACAAAAGCAGCTGTCAAGAGGCTTTCTGGAGACTGCGGTCAGATGGAACGTGAATTTCAAGCGGAAGTAGAGGCACTCTCGAGAGCTCAACACAAGAACCTTGTTTCCCTTAAAGGCTATTGTCGGCATGGCAACGACAGGTTGCTAATTTACTCGTACTTGGAAAATGGAAGCTTGGATTATTGGCTTCACGAGTGCGTCGACGTAGATTCAGCTCTCAAATGGGATATAAGACTCAAGATTGCACAAGGCGCGGCTCGCGGATTAGCTTACTTGCACCAAGGTTGTGAACCTTACATAGTGCACCGTGACGTTAAATCTAGCAACATACTTTTGGATGACAAGTTTGAAGCTCATTTGGCTGATTTCGGTCTCTCGAGGCTCCTTCAACCGTACGATACTCATGTCACAACAGACTTAGTAGGAACTTTAGGATACATTCCTCCAGAATACAGTCAGACACTGACAGCAACGTTCCGCGGCGATGTCTATAGTTTCGGCGTCGTTCTTCTCGAGCTTCTTACCGGTAGAAGGCCTGTTGAAGTCATCAAGGGGAAAAATTGCAGGAATCTGGTTTCTTGGGTTCATCAAATGAAACATGAAAATAAGGAGCAAGAAATATTTGATCTTGCCATTTGGCAAAAGGAAAGGGAGAAACAACTATTGGAAATGCTTGACATTGCTTGTAAATGTCTTGATCAAGATCCAAGGCAAAGACCTTCTATTGAAATGGTTGTTTCATGGCTTGATAGTGTTAAATTTGATGGATTTCAACAGTGA 1371 0.4245 MENLETLDLSYNDLSGTIPPSFNNLTFLSKFSVAHNRLQGPIPSGGQFLSFPSSSFEGNLGLCRDIDIDTDIRCKKFNEARPNLASGSSRKFSRSSVLGITISIGVGLALLLAVILLRMSKREEDKPNDNFDEEMNGSRPRRLSGALVSSKLVLFQNSDCKDLSVADLLKATNNFNQANIVGCGGFGLVYKAYLPNGTKAAVKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDVDSALKWDIRLKIAQGAARGLAYLHQGCEPYIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVHQMKHENKEQEIFDLAIWQKEREKQLLEMLDIACKCLDQDPRQRPSIEMVVSWLDSVKFDGFQQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02030 456 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 450 - -
Car01g02030 456 SUPERFAMILY L domain-like 2 63 - -
Car01g02030 456 Gene3D Ribonuclease Inhibitor 1 78 IPR032675 -
Car01g02030 456 ProSiteProfiles Leucine-rich repeat profile. 3 25 IPR001611 GO:0005515
Car01g02030 456 SUPERFAMILY Protein kinase-like (PK-like) 157 446 IPR011009 -
Car01g02030 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 297 309 IPR008271 GO:0004672|GO:0006468
Car01g02030 456 CDD STKc_IRAK 181 447 - -
Car01g02030 456 SMART serkin_6 175 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02030 456 PANTHER PHYTOSULFOKINE RECEPTOR 2 9 450 - -
Car01g02030 456 Pfam Protein kinase domain 176 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02030 456 Gene3D Transferase(Phosphotransferase) domain 1 251 453 - -
Car01g02030 456 ProSiteProfiles Protein kinase domain profile. 175 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02030 456 Gene3D Phosphorylase Kinase; domain 1 141 250 - -
Car01g02030 456 ProSitePatterns Protein kinases ATP-binding region signature. 181 203 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02030 Car-Chr1 45559595 45560965 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02030 1 452 Receptor kinase-like Gene Family AT1G55610 40.260 8.52e-103 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Car01g02030 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02030 - - mtr:MTR_2g078810 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02030 01 45559595 45560965 Car01g02030 01 45559595 45560965 ECH