Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02026 ATGGCTGCCAGAGATATCCTTCATAAGATGAAGGAAAAAGTTGGGTTTGGTTCAGACCCTGATTCAGGGAAAGGAAAGAGTAAGATGTCGAAACACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCGTATCACGCCATGGAAGATTATCTCGTTGCTCGATTTAAGCAAATTGATAACAACGAATTGGGCTTGTTTGCGATATTTGATGGCCATGCTGGTCACAATGTACCTAACTACTTGCAGTCACATTTATTCGATAATATCTTAAAAGAGCCTGACTTCTGGAAAGAGCCTGTAAATTCTGTCAAAAAAGCGTATAGTATAACCGATTCTAGTATTTTAGAGAAGTCAGGTGAATTAGGTAGAGGGGGTTCAACCGCAGTTACTGCAATATTGATTAATGGTCAGAAGTTAATAGTAGCCAATATCGGGGATTCTCGGGCCGTTTTATCAAAGAAAGGTGTGGCCAAACAACTTTCAGTGGATCATGAACCAATCACAGAACATGAAGATATAAAAAATAGAGGTGGTTTTGTCTCACGATTTCCAGGGGATGTTCCACGAGTTGATGGACGGTTGGCAGTGTCGAGGGCATTTGGCGACAAAAGCTTGAAAAAACACTTGAGTTCAGAGCCACATGTAACAGTGGAGAAGATAAACGATGATGCAGAGTTTGTTATATTAGCCAGTGATGGATTGTGGAAGGTAATGTCAAATCAAGAAGCAGTTAATACTATCAAAGATATAAAGGATGCTCGGTCTTCGGCAAAGCGCCTCACTGAAGAAGCAGTTAACAGGAAAAGCAGTGATGATATCTCCTGCATTGTTGTGAAACTTCAGTGA 849 0.4064 MAARDILHKMKEKVGFGSDPDSGKGKSKMSKHITHGFHLVKGRSYHAMEDYLVARFKQIDNNELGLFAIFDGHAGHNVPNYLQSHLFDNILKEPDFWKEPVNSVKKAYSITDSSILEKSGELGRGGSTAVTAILINGQKLIVANIGDSRAVLSKKGVAKQLSVDHEPITEHEDIKNRGGFVSRFPGDVPRVDGRLAVSRAFGDKSLKKHLSSEPHVTVEKINDDAEFVILASDGLWKVMSNQEAVNTIKDIKDARSSAKRLTEEAVNRKSSDDISCIVVKLQ 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02026 282 Pfam Protein phosphatase 2C 46 274 IPR001932 -
Car01g02026 282 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Car01g02026 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Car01g02026 282 SMART PP2C_4 32 279 IPR001932 -
Car01g02026 282 Gene3D - 29 282 IPR036457 -
Car01g02026 282 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 281 - -
Car01g02026 282 PANTHER PROTEIN PHOSPHATASE 2C 1 281 IPR015655 GO:0004722|GO:0006470
Car01g02026 282 CDD PP2Cc 41 281 IPR001932 -
Car01g02026 282 ProSitePatterns PPM-type phosphatase domain signature. 66 74 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02026 Car-Chr1 45534924 45538720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02026 1 282 PP2C-type Phosphatase Gene Family AT3G15260 72.664 6.23e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02026 K17506 - gmx:100500617 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02026 01 45534924 45538720 Car01g02026 01 45534924 45538720 ECH