Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02025 aTGGTGGGCTCAGGAGCAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTTAACTCAGACTGGACTTACTCTGTCTTCTGGACTATTCGTCCTCGCCCAAGAGTTAGAGGTGGTAATGGCTGCAAAGTTGGAGATGATAATGGAAGCTTGATGTTGATGTGGGAGGATGGATTTTGCAGAGGAAGAGGTTCTTCAGGTTGTCTTGAAGATATTGATGGAGAAGATCCTGTCAGAAAATCCTTCAGCAAAATGTCCATTCAGTTGTATAATTATGGAGAAGGGTTGATGGGAAAAGTTGCATCTGATAAGTGTCACAAGTGGGTCTTTAAAGAGCCAACAGAATGTGAACCCAATATCTCTAACTATTGGCAGAGTTCCTTTGATGCTCTTCCTCCTGAATGGACTGACCAGTTTGAGTCAGGGATTCAGACCATAGCTGTAATTCAAGCTGGACATGGTCTTCTTCAACTTGGTTCTTGTAAGATTATTCCAGAAGACCTTCATTTTGTCCTAAGAATGAGACACACATTTGAATCATTAGGCTACCAATCTGGTTTCTACCTCTCCCAACTCTTCTCATCAACAAGGAACACTTCTTCATCAACTTCACTTCCTTCAAAACAATCAACCCTTCCAATTAGGCCACCTCCACCACTCTTCAACTGGAATCAAAGATCACTCACTTCACCTTCTTCCATGCTATCCTCACCCAATTTTCAACAACATGCAGCTAGGCTTGGTTTTCCACAAACCAAAGATGAAACACACATGTTCCTCATGCCTCATGCATCACAAGAAACTCCAAGAATTGAAGATATGATGggaggaggaggaggaggaggaggaggagAGCATGAAAATGACATTAAATGGCCAAATGGGCTGTCTTTCTTTAATGCTCTAACTGGAAGAGCTGATGATGCTAAGCTTTTGTTTAATCCAGAGAGTTTAGGTGGAAAACAAGGTGatcataatcataatcataaccataatcaccctcttaatcaaaatcctaatTCAGATGGTTCAAACATGCAAAATGCAAGTGGAAATAACCCAAATGAGTTTTTGAGCTTGGATAGTCACCATGAAGGTGGGAGGAAAATGGACAAGTTTAAGAGGAGTTTTACTTTACCTACAAGAGTTGCTTCATCATCTTCATCCACTTCAATGGATCAACAAGGTGTGGAGTATAGGAATTCAGAAGGAGGTATGTATTCAGATGTTATGGAGACCTTTTTGGAGTGA 1284 0.3925 MVGSGAASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRGSSGCLEDIDGEDPVRKSFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKQSTLPIRPPPPLFNWNQRSLTSPSSMLSSPNFQQHAARLGFPQTKDETHMFLMPHASQETPRIEDMMGGGGGGGGGEHENDIKWPNGLSFFNALTGRADDAKLLFNPESLGGKQGDHNHNHNHNHPLNQNPNSDGSNMQNASGNNPNEFLSLDSHHEGGRKMDKFKRSFTLPTRVASSSSSTSMDQQGVEYRNSEGGMYSDVMETFLE 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02025 427 PANTHER GB|AAF34833.1 1 427 IPR044170 -
Car01g02025 427 MobiDBLite consensus disorder prediction 325 379 - -
Car01g02025 427 MobiDBLite consensus disorder prediction 343 370 - -
Car01g02025 427 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 20 189 IPR025610 -
Car01g02025 427 MobiDBLite consensus disorder prediction 210 229 - -
Car01g02025 427 PANTHER GB|AAF34833.1 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02025 Car-Chr1 45520854 45523382 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02025 21 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.759 3.09e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02025 - - gmx:100814723 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02025 01 45520854 45523382 Car01g02025 01 45520854 45523382 ECH