Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02024 ATGGATGATCTAGCAGGTCTACTTGAGGCAACAGGATCTAGATTCACTTCTTTAGAGCTTATTGGACAGGGATCATTTGGCGACGTATATAAAGGGTTTGACAAGGAGCTCAACAAAGAAGTTGCCATCAAAGTGATTGATTTGGAAGAATCAGAGGATGACATTGACGATATTCAAAAGGAAATTTCTGTTCTGTCACAATGTCGATGTCCGTACATTACCGAGTATTATGGTTCTTTTCTCAATCAAACTAAACTATGGATAATAATGGAATATATGGCTGGCGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCCTTGATGAAATGTCAATTGCTTACATTCTTCGCGATCTGTTGCATGCTGTCGATTACCTACATAATGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAATTAACAAGGACTATATCGAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCGCCTGAGGTTATTCAGAACACAGATGGATATAATGAGAAGGCAGATATCTGGTCTCTAGGAATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCCATGAGAGTGCTTTTCATCATACCTCGAGAAAATCCTCCACAGCTAGATGACCATTTTTCTCGCCCCATGAAAGAGTTCGTTTCATCATGTTTGAAGAAGAGGCCAAGTGCTAAGGAACTTCTCAAAGACCGTTTTATTCGGAATGCTAGGAAGAGTCCAAAGCTTTTGGAAAGAATAAGTAGGGAGCGTCCAAAATACCAGATAAAGGAAGAACTGGGGACACCTAGAAATGGCCCAAGAGGGGTTGGGGAGGGATCGGATACTATGAAGGTAGCAAGAGATTTTAGAGTCGAAGAAACCAATCGATCCAGCAGTCAGGGTAAAACGTTGAAAAGTTCTGAATGGGACTTTAGCATTGGTGAATCAGAGGGTACTGGAACCTTTCGAAGTGTTGCACGGCCACCTCAGTCTAGAGATAAGAAAACTGATGTTTCATATAACCAGCTTACCCAAAGAAAAGCTTTAGACGCTGGCTATCAAGGGGGATCCACCAATAAAAGTGCACTCAATCAATCACTTGAAAGTTCCTTCGGAAAAGATCATAGAGCTCCTTACCATCATGAGCATCCGGATAATCAACTAGACGATGATGAATTATCTGGGAATGGAACAGGAACTGTTGTTATACGCTCTCCAAAAGGATCAAGGCCATCTGTGTTTCGTGACCATAGCTCCCAGTCCAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACGAGTGGAACCGTTGTTTTACGTGGCCATCAGGACGATTCTGATTCTCCACGGACTCCGAGGTCCCGACTGGGACTTCATGACAGAAATTCAAATGCTTCACTTGAAGATAGTGCTGCAAACCTAGCTGAGGCAAAGGCTGCTATCCAAGGAGGGCTAAGAAAAGTGAATGCTCGGGAGAGACATTCCCGGGGAAAAATCAATAGCGATGTACAGGAAAGCAAGAAAGACCAAATGACCAGCAGCACTGATTCTTCCAGATCATATCGTGAATACATTGATGCACAAAGAGGCATGTCAAGATCGCATTATGCCAGTGACGATGAAGAAAGTGCTAGAATAATATCATCGTCAGCGCCATTATCAGTTTTGCTTATTCCTTCATTAAAAGAGGCCATTGCTGATGATCCAGAAGGACAAATCGCGCGGGCAGTTATGAATTCTTTAATAAACATGGAAGGCACAAAGCCTAGATCCTCCGATGTTCTTGTCAGAAAATTGCTTCAGCGATTGGCGAGTTCAAAGGAAGATTCATTGAAGGACTTGCAAGGACTAGCCAGCCAACTATTCAGCAAGGCCAAGTCAACAGAAGAAACCCGAAATGCGGAGGCTGATAACAGAAGGAAACAACATAGCAAGGAACCTCATCCAAATAGCAACTTAAGCCCGCTTGCAAGATTTCTTCTATCAAGATGGCAAGGCCAAACCTCGCGGGATCTAAACCAATCTTGA 2097 0.4311 MDDLAGLLEATGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDDIDDIQKEISVLSQCRCPYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIAYILRDLLHAVDYLHNEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDDHFSRPMKEFVSSCLKKRPSAKELLKDRFIRNARKSPKLLERISRERPKYQIKEELGTPRNGPRGVGEGSDTMKVARDFRVEETNRSSSQGKTLKSSEWDFSIGESEGTGTFRSVARPPQSRDKKTDVSYNQLTQRKALDAGYQGGSTNKSALNQSLESSFGKDHRAPYHHEHPDNQLDDDELSGNGTGTVVIRSPKGSRPSVFRDHSSQSSSSYASFEDVSTSGTVVLRGHQDDSDSPRTPRSRLGLHDRNSNASLEDSAANLAEAKAAIQGGLRKVNARERHSRGKINSDVQESKKDQMTSSTDSSRSYREYIDAQRGMSRSHYASDDEESARIISSSAPLSVLLIPSLKEAIADDPEGQIARAVMNSLINMEGTKPRSSDVLVRKLLQRLASSKEDSLKDLQGLASQLFSKAKSTEETRNAEADNRRKQHSKEPHPNSNLSPLARFLLSRWQGQTSRDLNQS 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02024 698 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 696 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 304 318 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 651 670 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 319 349 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 510 528 - -
Car01g02024 698 SMART serkin_6 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02024 698 MobiDBLite consensus disorder prediction 414 428 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 277 363 - -
Car01g02024 698 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Car01g02024 698 MobiDBLite consensus disorder prediction 393 487 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 645 682 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 466 480 - -
Car01g02024 698 Coils Coil 48 68 - -
Car01g02024 698 Gene3D Transferase(Phosphotransferase) domain 1 12 291 - -
Car01g02024 698 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 696 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 435 464 - -
Car01g02024 698 ProSiteProfiles Protein kinase domain profile. 15 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02024 698 MobiDBLite consensus disorder prediction 508 545 - -
Car01g02024 698 MobiDBLite consensus disorder prediction 396 413 - -
Car01g02024 698 CDD STKc_MST3_like 13 278 - -
Car01g02024 698 SUPERFAMILY Protein kinase-like (PK-like) 13 264 IPR011009 -
Car01g02024 698 Pfam Protein kinase domain 16 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g02024 698 MobiDBLite consensus disorder prediction 529 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02024 Car-Chr1 45489578 45505004 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02024 1 695 MAP Kinase Kinase Kinase Kinase AT3G15220 62.910 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Car01g02024 Pkinase 1.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02024 K08838 - gmx:100815042 1119.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02024 01 45489578 45505004 Car01g02024 01 45489578 45505004 ECH