Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02015 ATGCGATTGTCACCGGAAGGAAAGGGCAACGGTGGATCGGGTTCGCGGGTTCGGAAGAAACAAAAGAAGTTAGATGCAATATGCGAGGAAGAGTATAATAGAAACCATGGTGAGTTAAATGAGGGTGATGGTTTGAACCCTGAACCAGGGGTTCGCCGAAGCTCGAGGGTTCGGCGTGCCCCGGTTTTACTTGATGTGTCGCCTTCTCCCAAGAGGAAACGGCAGAAGTTAGGGGAGGATGTAGTAGGGAAGAGTGTGGAAGGTGATAAGAATTTAGAGAGAGAAATTGGGGGTTCTAGTGGTGGGAATTGGAGTTTGAGGTCGAGATCGAAGGGTAAGAATGTAGGTTTTGAGGTGAAGGAGGAGAAGGAATTGCCTCATAGGAAAAGGAAACTTTTTAACGAGGAGTTAAAGGTTGATAGGATCGACGAATTGGAGGTTGTGGAGGTTGATAAGAAAGAAGAGTTGGAAACTGTTCTGTCAAAAATGGTTAAGTCTAAGAAAAGAGTGGGGACGATTGAAACAACAAAGCATGAAAAACGGGATAATGAGAATGAATGTCAAGGGAGTTTGGATGAGAGTAAGAGTCAAGAAGTGGAGATTGTATTGAACAAAGGTGAGGGGAGTGTTTCGGTTAGGGAGACGGAATTGGCTGATGAGAATCCAATAGATTTGAGGGATGAGAATGCTGCTTCTATGATGGAGAGTGAGGAGAGAATTGAAACTGATAATTTGCAAGTAGAGGAGTGTAGTGGTAGTGTTGAACCGTCTCAGGTGGAATGTGTTGAAACTGTGGATGAGCAGGGTGATCAGTTAGAGAGTGAGAAGGAAGGAAAAAATGCAGGTGATGTAGCTGGAATTGCTGGAGTTTCAACTGAACATGTAGATAATGAAGGTTCTATTGATAAGGAGGTTGGCATTGATGACAATGTCGCGAAGGATGAGAATATTGGGAAGATGGATGAGTTGAAACAATCGTCAAATGTTGACAAGTCTGAGTACCGATGTATCAAAGAGGGAAGGCGGTGTGGTTTGTGTGGAAGAGGGAGTGATGGTAAGCCTCCCAAAAGGCTAATTCAGGAAAATGGTGATAGTGAGAACGAAGCTTATAGCGGGTCATCAGCTTCAGAGGAGCCCACTTATGATACCTGGGATGGTTTTGATGATGAACCTGGCTGGCTTGGACGTCTCTTGGGTCCTATTAATGATCGTTACGGTATTGCTGGAATATGGGTGCATCAGAATTGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGTCGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCATTGGTTGTCGTGTTGATCGGTGTCCTAGAACCTATCACTTGCCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCTTGTACAGATCATCGCCATCTTTTCGAACCTTGTGGTAATAAATATTTAGCCTGGATAAAGAAGTTGAGGGCTAGGAAAATGATGTGGGAGACGAGGAAGCGTTCAAATGATGCTTCAAGAAAGGATATTGATGCAGAAGAGAGATGGTTGGAAAATTGTGGGGAGGATGAAGAATTTCTGAAACGCGAGAACAAGAGGCTTCAGCGTGATTTATTGAGAATAGCCCCGGTGTATATTGGTGGTGCAGACTCTGCCGGCGAAAATTCATTTCAGGGATGGGAATCAGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATTATTCCTCTACTATATCCTGATTTCTTCGATAACTTGGGGCTTACGCCTCCAAGAGGTGTTCTCTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGATCATTGATTGGTGCATGTGCTCGTGGAGATAGACGGATTGCATATTTTGCCCGTAAAGGTGCAGATTGCTTGGGGAAATATGTAGGTGATGCCGAGCGCCAACTAAGACTATTATTTCAGGTTGCGGAGAAGTGTCAACCTTCGATAATATTCTTTGATGAGATAGATGGACTGGCACCCTGCCGTACTAGACAGCAAGATCAGACTCATAGTTCTGTTGTGTCGACATTGCTTGCTCTTATGGATGGTTTAAAATCTAGGGGTTCGGTTGTGGTCATAGGTGCAACAAACCGTCCCGAAGCTGTTGACCCAGCGCTTAGGCGCCCTGGAAGATTCGATCGGGAAATTTACTTTCCATTGCCATCAACTGAAGACAGAGCTTCCATTCTCTCACTTCACACGCAGAAGTGGCCAAAACCAATTAGTGGATCGATGCTTGGGTGGATTGCAAGGAAAACTTCTGGCTATGCTGGTGCTGATCTCCAGGCTCTTTGTACGCAAGCGGCCATGAATGCGCTGAGGAGAAATTTCCCTTTGCAAGAAGTGCTATCAGTCGCTGAAAAAAGATGTTCTGGTAGTGATGGTAAGAACATTCCTCTTCCATCCTTTACTGTGGAGGAGAGGGATTGGGTAGAGGCTTTTTTGTCTTCCCCGTTACCGTGTTCCCAGAGAGAAGCTGGAAATGCTGCGAACAATGTTGTATGCTCCCCTCTTCCTGTTCAACTAATTCCTTGTTTGTTGCGGCCGTTATGCACTATTCTTGTATCTCTTTATCTTGATGAACGACTGCGATTGCCACTTCCTATATCTAAAGCCATGACATCGATTAAGAATGTAATGGTTTCTGCTCTAGACCAAAAGAAAATGCCCATTGATCACTGGTGGTTGTACCTTGATAATTTTCTTCAAGAAACAAATGTTGCTTATGAGGTAAGGAAGTGTCTTAGTTGTTCTGGCATTTTATCTGCTGACCATGGCTTTTCTGGTTCTTGTGATACTGTGGATCCTTCCGACAATAAACCCTCCATATGTAATGGTAGATTACCAAACACGTCATTTGGATTGACCAACAAATCAGGATTTCGAATATTAATTTACGGAAATCCCCGATCTGGGCAGAGACATCTTGCATCATGCCTACTTTACTGCTTTATTGGAAATATTGAAGTACTAAAGATTGATATGGCAACTATTTCACTAGAAGGACATGGAGATGTGGTTCAAGGGATTGCACAAATATTAATGAAATGTGCTAGCATGAAATCGTGCGTAGTATTCATGCCAAGAATTGATTTGTGGGCTGTGGAAGAAGATTTTCAAATTGCTGAAAAGACTGATTCCTGCTCAGTAAATCATCTATCACCAAGCCAAATTGTTGAGAAGGAAAATGGGATCAATACTGGGAAAAACTCAAAAGAGAAGACAAAATGCCAAGCCAACAAAAAGGCTTCATATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTTTGTCCACATCCTTGATGATTCTGGCTACTTCCGAAGTTCCCTGTACTGAACTTCCACACAAGGTAAGAGGATTCTTCAAGAGTTATCAATCTAAGGAAAGCCAATCAACTCCTTTAGTGCAAACTGTTCCTCAGTTCTCTCTGCAGATTGATGAGAATTTTGATCACGAATTGGCAATTGATCTATCTGCAATAGAGCTTTTAAGAAATTTAGTTGAACAGCGGGTGCAATTGATTCATCAGAGATCTCATGCTCACATCGGTGTCCAGAAGTGGGAGAGAGCCTATGAATCAGTTGAAGTTTGTAAAGATAAGGTAACTCCCACAAAAGAAAATGAACCAGCCAATGAGAAGAAGGGTGAAGTCCAATTTCCCGAATCCTCGACAAAACTTCCACAACCCAACAGTAGGTCACTGAAGGGAAAATCAAATCTTTTGATGGCAATATCCGCATTTGGCTATCAAATTCTTCTATACCCTCATTTTGCTGAACTTTGTTGGGTCACGTCGAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGGCCTTGGAGAGGCTGGCCTTTCAATTCCTGTATAATTCGTCCTAACAATTCACAAGAAAAGGTGGTAATTTCTGGTAGCTCGGGTGGCACTAAAACAAAAGAAAGTGCTGGTTTAGTTAGAGGCTTGGTTGCTGTCGGTTTATCAGCTTACAGAGGTGTTTATAAATCAGTTAGGGAGGTTTCCCTTGAGGTAAGGAAAGTTCTTGAGATCTTAACCGAGACAATTAATATGAAAATTCAAGCTGGTAGAAACAGATATCAATATCTCCGTATTTTATCACAAGTGGCTTATTTGGAAGATATGGTCAACAATTGGGCTTATGCATTGCTGAGTCTAGATCAGGATTCTCCGGAGCTAGCGGCAAAGGTTTTACCAGAAACTGTTAGGTCTTTAAACAGTGATGTCCCATGTGAAGACCGCCACCAAGCTGAAGGTGATACTGGTCGTGACGGCCGAGAAGCAAGTTTGGAAGGATCTCCACCTAACCATCCTTATCCAGATAAGCATATTAATGACAACTCTCAGGAGAATGGGGTATTATCTGGACTTTCTGAATCAGTAGCTGCTGAAAATCACGAAGCTGCAGGTGAAGAACTTGGAATGCTGAAAGACTTGAATATATCCACATGCGCACGCTCTACTGTCCTTTCTGAAAATGGATTTCACACAACCTATGAACAAGAGAATGTTGAGATTGGTAACATTAAATCAAGTGATGTTGAATCTGATAAACACGAGAATACTATAGACATCGATGCCTCTTCAAGTAAGGACAAGGGTGCAGCCGAATCCGGGGTTGTTTGCTTGTATCAATGTTGCCATCAATGTATTTGCAGTCTGTATCATCTGACACGCAAATTACTTGTTCGCGGGTGGGAGTCGAATATATGCCATTGGACAATTGAAGATGTCCATGATACTGTTTCTTCATTATCTGTGGATCTTATTTCAGCAGTTAGAAATTATTACATGGCAGAAGATTTCACCGAGTTATCAAATAAAACATCAAGACATGGAAAGGATGGAACACCTCTCGAATGTTTGAATCCGATAAAGTGTAATACCAAAAATCGAGGCAAGGATGTTGTGCTGGCTGAATGTGTTTCTCACTCGGCAACTCAAGATGAAAGTGTAAGCGACGATACGGTAACGAATGAACCAGTGAAGCTTGATTTGAAATTTGTTTTCAGAGATGGTGTCCTAGTTCCTATGGACACAGTAAAGGATGCCCCTCTTCACTGTAAATTTGAGAAACTGTGTCTTTGTTCTCTCATTGAGTTGATAGTAAAGACTAAGGGCCCTTTAGAGTAA 5250 0.4272 MRLSPEGKGNGGSGSRVRKKQKKLDAICEEEYNRNHGELNEGDGLNPEPGVRRSSRVRRAPVLLDVSPSPKRKRQKLGEDVVGKSVEGDKNLEREIGGSSGGNWSLRSRSKGKNVGFEVKEEKELPHRKRKLFNEELKVDRIDELEVVEVDKKEELETVLSKMVKSKKRVGTIETTKHEKRDNENECQGSLDESKSQEVEIVLNKGEGSVSVRETELADENPIDLRDENAASMMESEERIETDNLQVEECSGSVEPSQVECVETVDEQGDQLESEKEGKNAGDVAGIAGVSTEHVDNEGSIDKEVGIDDNVAKDENIGKMDELKQSSNVDKSEYRCIKEGRRCGLCGRGSDGKPPKRLIQENGDSENEAYSGSSASEEPTYDTWDGFDDEPGWLGRLLGPINDRYGIAGIWVHQNCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPRTYHLPCARANGCIFDHRKFLIACTDHRHLFEPCGNKYLAWIKKLRARKMMWETRKRSNDASRKDIDAEERWLENCGEDEEFLKRENKRLQRDLLRIAPVYIGGADSAGENSFQGWESVAGLKDVIRCMKEVVIIPLLYPDFFDNLGLTPPRGVLLHGYPGTGKTLVVRSLIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPCRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQKWPKPISGSMLGWIARKTSGYAGADLQALCTQAAMNALRRNFPLQEVLSVAEKRCSGSDGKNIPLPSFTVEERDWVEAFLSSPLPCSQREAGNAANNVVCSPLPVQLIPCLLRPLCTILVSLYLDERLRLPLPISKAMTSIKNVMVSALDQKKMPIDHWWLYLDNFLQETNVAYEVRKCLSCSGILSADHGFSGSCDTVDPSDNKPSICNGRLPNTSFGLTNKSGFRILIYGNPRSGQRHLASCLLYCFIGNIEVLKIDMATISLEGHGDVVQGIAQILMKCASMKSCVVFMPRIDLWAVEEDFQIAEKTDSCSVNHLSPSQIVEKENGINTGKNSKEKTKCQANKKASYAWMSFIEQVESIGLSTSLMILATSEVPCTELPHKVRGFFKSYQSKESQSTPLVQTVPQFSLQIDENFDHELAIDLSAIELLRNLVEQRVQLIHQRSHAHIGVQKWERAYESVEVCKDKVTPTKENEPANEKKGEVQFPESSTKLPQPNSRSLKGKSNLLMAISAFGYQILLYPHFAELCWVTSKLKEGPCADVSGPWRGWPFNSCIIRPNNSQEKVVISGSSGGTKTKESAGLVRGLVAVGLSAYRGVYKSVREVSLEVRKVLEILTETINMKIQAGRNRYQYLRILSQVAYLEDMVNNWAYALLSLDQDSPELAAKVLPETVRSLNSDVPCEDRHQAEGDTGRDGREASLEGSPPNHPYPDKHINDNSQENGVLSGLSESVAAENHEAAGEELGMLKDLNISTCARSTVLSENGFHTTYEQENVEIGNIKSSDVESDKHENTIDIDASSSKDKGAAESGVVCLYQCCHQCICSLYHLTRKLLVRGWESNICHWTIEDVHDTVSSLSVDLISAVRNYYMAEDFTELSNKTSRHGKDGTPLECLNPIKCNTKNRGKDVVLAECVSHSATQDESVSDDTVTNEPVKLDLKFVFRDGVLVPMDTVKDAPLHCKFEKLCLCSLIELIVKTKGPLE 1749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02015 1749 MobiDBLite consensus disorder prediction 1 121 - -
Car01g02015 1749 Gene3D - 754 813 - -
Car01g02015 1749 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1461 1745 - -
Car01g02015 1749 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 49 1458 - -
Car01g02015 1749 Pfam PHD-like zinc-binding domain 413 492 - -
Car01g02015 1749 Coils Coil 537 557 - -
Car01g02015 1749 Gene3D - 579 753 IPR027417 -
Car01g02015 1749 MobiDBLite consensus disorder prediction 18 38 - -
Car01g02015 1749 Pfam ATPase family associated with various cellular activities (AAA) 618 753 IPR003959 GO:0005524|GO:0016887
Car01g02015 1749 MobiDBLite consensus disorder prediction 168 195 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1546 1570 - -
Car01g02015 1749 ProSiteProfiles Extended PHD (ePHD) domain profile. 380 492 IPR034732 -
Car01g02015 1749 Pfam AAA+ lid domain 780 811 IPR041569 -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1238 1268 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 364 380 - -
Car01g02015 1749 CDD AAA 612 753 - -
Car01g02015 1749 PANTHER AAA DOMAIN-CONTAINING 1461 1745 IPR045199 -
Car01g02015 1749 SMART AAA_5 614 755 IPR003593 -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1446 1466 - -
Car01g02015 1749 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 580 819 IPR027417 -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1445 1491 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1550 1570 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 1238 1255 - -
Car01g02015 1749 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 338 494 IPR013083 -
Car01g02015 1749 MobiDBLite consensus disorder prediction 69 94 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 168 193 - -
Car01g02015 1749 MobiDBLite consensus disorder prediction 354 381 - -
Car01g02015 1749 ProSitePatterns AAA-protein family signature. 723 741 IPR003960 GO:0005524|GO:0016887
Car01g02015 1749 PANTHER AAA DOMAIN-CONTAINING 49 1458 IPR045199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02015 Car-Chr1 45391418 45398343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02015 580 815 Calmodulin-binding Proteins AT3G56690 41.176 5.11e-45 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02015 01 45391418 45398343 Car01g02015 01 45391418 45398343 ECH