Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02011 ATGAAGAAATCCAAGCAAACTCATATGAACCCTAATTGGGCTCAACTCCAACAAAAGCTGAATCTTAATAGCTCAAAAGCTTCAAGGACCCTCAATGATTTTGAAGAAGACATGCCTAAATCAATATTGGGGAAACGTAAAGAgaggatagatgatgatgatgatgatTGCGAGATTAACCCTCTTCATCCTGTAAATGATGATGCAAGTCTGACAGATGCTGTGGCCATGGATTGTGAAATGGTTGGGGTTGGTAATGGAAACAAAAGTGCTCTTGGAAGAGTAACACTGGTTAACAAGTGGGGTAATGTTATTTACGACGAGTTTGTACGGCCAATGGAGCGAGTTGTTGACTTCCGGACCAGAATTAGTGGCATAAGACCTCGAGATCTGAGAAAAGCAAAGGATTTTTGTACTGCTCAGAAGAAGGTGGCAGAGTTGATCAAAGGAAGGATCCTTGTAGGTCATGCCTTGTCCAATGATCTTAAGGCATTGTTATTAAGTCATCCCAAAAAGGATATACGAGATACCTCCGAGTACCAACCATTTCTAAAGTCAAGTAGTAGAGTAGCATTGCGGCATCTCGCTGCGGAACATCTTGGTGCGAAGATTCAATCAGGAGAGCACTGCCCGATAGACGATGCCCGTGCTGCTATGTTGCTTTACCAAAGAAACAGAAAAGAATGGGAGAAGAGCTTAAAAGACAACTTTCGGACCAAACCGAATAAAAAGAAACGGAAGAAGAAAACAGATACAAAAGAATGA 765 0.4052 MKKSKQTHMNPNWAQLQQKLNLNSSKASRTLNDFEEDMPKSILGKRKERIDDDDDDCEINPLHPVNDDASLTDAVAMDCEMVGVGNGNKSALGRVTLVNKWGNVIYDEFVRPMERVVDFRTRISGIRPRDLRKAKDFCTAQKKVAELIKGRILVGHALSNDLKALLLSHPKKDIRDTSEYQPFLKSSSRVALRHLAAEHLGAKIQSGEHCPIDDARAAMLLYQRNRKEWEKSLKDNFRTKPNKKKRKKKTDTKE 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02011 254 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 5 251 - -
Car01g02011 254 Gene3D - 69 249 IPR036397 GO:0003676
Car01g02011 254 CDD REX4_like 75 223 IPR037431 GO:0006364|GO:0008408
Car01g02011 254 PANTHER INTERFERON STIMULATED EXONUCLEASE GENE 20-RELATED 5 251 IPR034920 -
Car01g02011 254 MobiDBLite consensus disorder prediction 238 254 - -
Car01g02011 254 SMART exoiiiendus 73 231 IPR013520 -
Car01g02011 254 MobiDBLite consensus disorder prediction 231 254 - -
Car01g02011 254 MobiDBLite consensus disorder prediction 1 49 - -
Car01g02011 254 Pfam Exonuclease 75 222 IPR013520 -
Car01g02011 254 MobiDBLite consensus disorder prediction 30 49 - -
Car01g02011 254 MobiDBLite consensus disorder prediction 7 29 - -
Car01g02011 254 SUPERFAMILY Ribonuclease H-like 74 230 IPR012337 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g02011 74 228 C2H2 Transcription Factor Family AT5G40310 37.427 2.19e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g02011 K18327 - gmx:100819122 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02011 01 45357150 45360591 Car01g02011 01 45357150 45360591 ECH