Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01999 ATGAGTGGAGAGATAGTGGAGGTTGACGGTGGTCACATTATACGGTCAAGAGGTAGAAAAGACCGTCACAGTAAAGTATGCACCGCCAAAGGCCCAAGAGACCGACGGGTCCGTCTTTCGGCCCACACCGCTATTCAATTCTACGATGTACAAGATCGATTGGGCTATGACCGGCCCAGTAAAGCCCTTGATTGGCTCATTAATAAAGCCAAGCCCGCCATCGATCAACTCGCTCAACTTCCTCCGTGGAAACCTACTCTCCTCACTAAACAACAGCAAAACGACGACGTTCCACAAAACCAAAACGAACACGAGTTTCACTTTCTTCAGAACTTCAATAGCAACAACAACAATTTTCTTCCGTTTGATACTGAAACGACGTCGTCTTCGCCGATTCACTTTCAAAGCTATAGTACTCATGATGACTTGAGGCTCTCGCTTCAACAACATCAGAACCAGCACGTGCATCCGCACGTGCTTTTCGCCGGAAACCTTGATGGAATGGTAGCATGGAATTCCGGTGCTACTATTGATACTGGtagtaataataataataataatcatcatcatgatgatgttaatTCCGGTGGAGGTTTTGTGTTTCATGCAGCTACACCGTCGCCGGCGGTTTTTCCGGCGGTGATGTATGGTCAGAATCAGTATCTTTCACAGAGGGGACCCCTTCAGTCCAGTAACACTTCTTCAGTTCGTGCTTGGATAGATGCGCCGACGTTTGTTGCCGCTGATCACCGACGTGGTCATGCGGTTGCTATGTCGGGTACCGGATTTGTTTCTGACAGCTTTTCCGGTTTCCGCGTGCCGGCACGAATTGGGGGTGATGAGGAGGAGGAGCATGATGGTTTATCTGACAGACCGTCCTCTGCTTCATCCGATTCTCGCCGTTGA 906 0.4757 MSGEIVEVDGGHIIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKALDWLINKAKPAIDQLAQLPPWKPTLLTKQQQNDDVPQNQNEHEFHFLQNFNSNNNNFLPFDTETTSSSPIHFQSYSTHDDLRLSLQQHQNQHVHPHVLFAGNLDGMVAWNSGATIDTGSNNNNNNHHHDDVNSGGGFVFHAATPSPAVFPAVMYGQNQYLSQRGPLQSSNTSSVRAWIDAPTFVAADHRRGHAVAMSGTGFVSDSFSGFRVPARIGGDEEEEHDGLSDRPSSASSDSRR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01999 301 MobiDBLite consensus disorder prediction 274 301 - -
Car01g01999 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 144 IPR005333 GO:0003700
Car01g01999 301 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 144 300 IPR005333 GO:0003700
Car01g01999 301 MobiDBLite consensus disorder prediction 276 301 - -
Car01g01999 301 ProSiteProfiles TCP domain profile. 19 77 IPR017887 -
Car01g01999 301 PANTHER TRANSCRIPTION FACTOR TCP4 144 300 - -
Car01g01999 301 PANTHER TRANSCRIPTION FACTOR TCP4 2 144 - -
Car01g01999 301 Pfam TCP family transcription factor 18 124 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01999 Car-Chr1 45153723 45155790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01999 3 300 TCP Transcription Factor Family AT1G53230 43.288 1.06e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car01g01999 TCP 3e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01999 - - cam:101504111 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02440 01 50109880 50112653 Car01g01999 01 45153723 45155790 ECH
Car06g01973 06 19707540 19708723 Car01g01999 01 45153723 45155790 ECH
Car01g01999 01 45153723 45155790 Car01g01999 01 45153723 45155790 ECH