Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01996 ATGAACAACGGAGTGTACAGTTTCCGGACGTGTCTCCGCCTCCCGGAGCAGTCAATATTTCGATCAACTCCTCTCTCATTCCGATTCCGGCGCCGTTTTCTCGTCACCGCATCATTAACCGAGAAGAAGAAAGAGAAGGTGATCGTTATTTCTGGACCTACCGGTTCCGGCAAGAGCCGCCTCGCAATGGAACTCGCAAAGCACCTCAACGGAGAAATAGTTAGTGCTGATTCTGTTCAGGTGTATCGGGGTCTTGATGTTGGATCTGCCAAGCCTTCGTTAAATGATAGAAAGGAAGTGCCGCATCATCTGGTTGACATACTTCACCCAACTGAAGATTATTCTGTTGGACAGTTTTTTGAGGATGCAAGGCAAGCGACTAGATCTATTCTTGACAACGGCCGTGTTCCCATAATTGTTGGGGGCACTGGACTGTATTTAAGATGGTTCATATATGGAAAACCAGATGTGCCTAAAGCCTCTCCAGAGATAACATCTCAAGTATGTATAGAGTTAGCTGAACTGCAGAGAAATGATGACTGGGATGCTGCTGTGCAGTTGGTGGTAAAAGCAGGTGATCCAAAGGTCCAACATTTAGCAGTGAATGATTGGTACCGATTACGGCGTAGTTTTGAGATTATTAAGGCAAGCTTGCTATTTTATAAATCTAGTGGATCACCTCCTTCTGCTTTTCGGGTACCATATGATTCTTTCAGGGAACAGGGTGATTGTAGAGTTGCTGATGGTTCTGATTCATCTGATATGACCACTTATTCTGATGCAACGAAAGCAACCAATTCGGCAGAGTTAGACTACGAGTTCTTGTGTTTTTTCCTTTCTAGCGACAGACTTGACCTCTATAAATCAATTGACTATCGGTGTGAAGATATGCTATTAGGAGGTGATGGCATTTTGTCCGAGGCTCAATGGCTTCTTGATACCGGTCTTCATCCAAACTCCAACTCTGCAACAAAAGCAATTGGATACAGACAAGCCATGGAGTACTTACTAGGATGCAGACAACAAGGGGGTCAGAGTTCAGCTGGAGAATTTTACAGATTCTTGTCTGAATTTCAAAAAGCATCACGGAATTTCGCGAAACGACAGCTGACTTGGTTTCGCAATGAACGTATATACCATTGGATTGATGCTTCTAAACCTCTGGAAACCGTTGTCAACTTCATTCATGATTTATACCGTGATGGGAGTGGAAGTCTTTCTGTGCCTGCATACCTTAGAATGTCGAGAGATATTACTAATCCTCGAATAGCTGCTAAACTGAAGTCTTACCGCACCAAAAATAGGCATTTTGTGACGGGGGAGGATTGTTTACCTATTTTGGAATGGATAAAGAAAACTCAGAAGTGA 1368 0.4357 MNNGVYSFRTCLRLPEQSIFRSTPLSFRFRRRFLVTASLTEKKKEKVIVISGPTGSGKSRLAMELAKHLNGEIVSADSVQVYRGLDVGSAKPSLNDRKEVPHHLVDILHPTEDYSVGQFFEDARQATRSILDNGRVPIIVGGTGLYLRWFIYGKPDVPKASPEITSQVCIELAELQRNDDWDAAVQLVVKAGDPKVQHLAVNDWYRLRRSFEIIKASLLFYKSSGSPPSAFRVPYDSFREQGDCRVADGSDSSDMTTYSDATKATNSAELDYEFLCFFLSSDRLDLYKSIDYRCEDMLLGGDGILSEAQWLLDTGLHPNSNSATKAIGYRQAMEYLLGCRQQGGQSSAGEFYRFLSEFQKASRNFAKRQLTWFRNERIYHWIDASKPLETVVNFIHDLYRDGSGSLSVPAYLRMSRDITNPRIAAKLKSYRTKNRHFVTGEDCLPILEWIKKTQK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01996 455 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 37 454 IPR039657 -
Car01g01996 455 Gene3D - 44 425 IPR027417 -
Car01g01996 455 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 37 454 - -
Car01g01996 455 TIGRFAM miaA: tRNA dimethylallyltransferase 47 214 IPR018022 GO:0008033
Car01g01996 455 Hamap tRNA dimethylallyltransferase [miaA]. 47 393 IPR018022 GO:0008033
Car01g01996 455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 179 IPR027417 -
Car01g01996 455 Pfam IPP transferase 80 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01996 Car-Chr1 45081662 45086661 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01996 50 179 C2H2 Transcription Factor Family AT2G27760 33.846 8.76e-19 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01996 K00791 - gmx:100808814 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01996 01 45081662 45086661 Car01g01996 01 45081662 45086661 ECH