Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01971 ATGACGACGACAACAACCTTCGCACAATTCTACGACTCATGGTTCGACCAATTCCACTGTTTAGTCCAACAACTCAACACGCCAAACCAAACAGACGCAGAGGAACTTATCCGGAAGGTGATGTCCCACCATGAGGACTACTACAATGCAAAATCAATGGCTGCGGAGAAAGATCCTCTCCACGTGTTAGCATCTCCATGGGCCACAACACTTGAAAGATCACTTTATTGGATCGCAGGGTGGAGACCCACTACAGCATTTCACCTCATATACACTGAATCATCTCTCCTATTTGAGTCTCACATTATTGATATTCTTCGTGGACTCCGTACCGGTGATCTTGGTGATCTCTCCCCAACTCAGTTCCGTCGTGTCAGCGACTTGCAATGTGACACTGTGAAGGAAGAGAATGCAATAACAGAGGAGTTATCAGAGTGGCAGGACAATGCGAGCGAGTTGATGGGTTCAGAAGATGATATCAACGAGAATATCGGACGACTGGTATGCATTATAAAGAAAGCGGATGATCTACGGCTGAGGACGTTGCGCAGTGTGGTCGAGTTTTTGTCGCCACAACAGGCTATCGAGTTCTTGATTGCCTCAGCTGAGTTGCTTGTTGGGATACGTGGTTGGGGATTGAATCACGACCGTTCACGGCCTAGGCCATCATGA 672 0.4762 MTTTTTFAQFYDSWFDQFHCLVQQLNTPNQTDAEELIRKVMSHHEDYYNAKSMAAEKDPLHVLASPWATTLERSLYWIAGWRPTTAFHLIYTESSLLFESHIIDILRGLRTGDLGDLSPTQFRRVSDLQCDTVKEENAITEELSEWQDNASELMGSEDDINENIGRLVCIIKKADDLRLRTLRSVVEFLSPQQAIEFLIASAELLVGIRGWGLNHDRSRPRPS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01971 223 ProSiteProfiles DOG1 domain profile. 4 218 IPR025422 GO:0006351|GO:0043565
Car01g01971 223 Pfam Seed dormancy control 21 92 IPR025422 GO:0006351|GO:0043565
Car01g01971 223 PANTHER DNA-BINDING PROTEIN-LIKE PROTEIN 3 219 - -
Car01g01971 223 PANTHER - 3 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01971 Car-Chr1 44748528 44752392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01971 36 200 bZIP Transcription Factor Family AT5G06960 24.725 5.14e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01971 - - gsj:114374825 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01971 01 44748528 44752392 Car01g01971 01 44748528 44752392 ECH