Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01946 ATGAGAACTTCCTCTCAATCTCTCTTCCTTTCACTCATTGTCATTTGGTTCATATCTCTAACAGCTTTTGGAGCTACAACTATTCACCCCGACGAAAAGAAAGCTCTTGAAGATATAGCTAATTCACTTGGTAAGAAGGATTGGAACTTCGACATAGATCCATGCAGCAACAATTCTAACTGGGCTACGCCTACCATATCGAATATCGTGGAAAACAATGTGACCTGTAACTGTTCTGTTGCTGGTGACAACTTCTGCCATGTTGTTACAATAACTTTGAAAGGGCAAAATCTCCCCGGCAATCTCCCACCGGCACTGAGCAAGTTGCGTCACCTTCAAATTATTGACCTCTCTCGCAATTACTTGAATGGTACAATTCCTAAAGAATGGGGCTCTATGTCGAATCTTCTTAACATTACTCTACCCGGAAATCGACTAACGGGTTCAATACCGAAGGAGATTGCAAACATATCTACTCTAATACAGTTGGAATTAACTGCCAACCAAATGTCTGGAAATCTTCCTCCTGAGCTTGGGAACCTAGCCCAGATTCTAACACTGAGACTTTCCTCTAACAATTTTACTGGAGAACTACCTTTGACATTGGCCAAGCTCACTACATTGCGAGATTTACAAATTTCAGACAACCAATTCTTTGGAAAGATACCAGATTTTATTCAGAACTGGACAAATATCTATTCACTAATCATTCAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGAAATTTCACGTTTGAGAAACTTAACTGACTTGAGAATTAGTGATTTGAATGGATCTGAATATGCATCTTTGCCACAGCTTAAAAATATCCCATTGTTAAAAACTCTGATTTTGAGGAACTGCAACATCAATGGGAAGCTACCTGATTATCTTGGAAATATGACAACATTAAAACATTTAGACCTCAGTTTTAACAAATTAAGCGGAACAATTCCGATTTCCTATGCTATCACGAGCAGTGTACAATACATATTTTTAACTGGAAACCTTCTCACTGGCCCAATACCTCCTTGGAAAGCGAAGATTAACGTAGATCTTTCATACAATAACTTTAGCAACGACCAAGTGAGTCAGAAATGTCGAAATGAAAATGTGAACTTGTTTTCTACGTCATGGACAAGCAATGACATAGGAACAATTTCGTGTCCGGGCGTTCAATGTGACAAACCCGCATACTCCCTTTATATAAATTGTGGTGGAATGCAAGCAACAGTCAATAGAAAAGTTTATGATTCAGATTCAGATTCACCTGGACCAGCAAGATTCCATGTCGGTTCAACAGGAAATTGGGCATTTAGCACCACTGGTATATACATGGATAGTAATCAACTTAGAGAAACTTATCCCCCGCAAAATATCGCTACACTTACTATGGTGGACTCTGAATTGTACACGAATGGACGTGTTTCTCCTATTTCTTTGACTTATTATGGATTTTGCCTGGCAAATGGAAGCTACACAGTAAATCTACATTTTGCTGAAATAATGTTCACAGACGATCAAACTTATGCTAGTCTTGGAAGGCGTGTATTTGATATCTACCTTCAGGGAAAGCCAATGCAAAAGGAGTTTAATATTGCAGAAGAAGCAGGAGGAGTTGGTAAGGAAATCATAAAACAGTTCAAAGATGTTGCTGTTACTAGTAGTACCTTAGAGATCCGCTTATATTGGGCTGGAAAAGGGACACAGGCTGTCCCAAATAAATCAGTATATGGTCCTCTTATATCAGCTATATCAGTGGAATCTGACTCTGCACCTGGAAGCAGTATATCCGCTGGAGCTGTGGTTGGAATTGTTGTTGCGGCAATAAGTATTATGATTATAGTATTTGGTATACTTTGGTGGAAAGGATGTTTCCGAAAGAAAAACTCTTTAGCAAGAGAGGTGATGAGTTTAGACCTACAAACGGGCTTATTTACCTTAAGACAAATAAAAGCAGCAACCAACAACTTTGATATTAACAATAAGATTGGAGAAGGAGGATTTGGTCCTGTGTACAAGGGGCGTTTATCCAATGGAACATTGATTGCAGTCAAGCAACTTTCTTCTAAATCAAAGCAAGGGAATCGTGAGTTTTTAAATGAAATAGGCATGATTTCTGCTTTGCAACACCCATATCTTGTTAAACTCTATGGTTGTTGTGTGGAGGGAGATCAATTGTTGTTGGTATATGAATACTTGGAAAACAATAGTCTTGCTCGTGCTTTATTTGGTCCAGAGGAACACCAAATAAAATTAGATTGGTCAACAAGGCAGAAGATATGTGTTGGTATTGCTAGAGGTTTGGCATACCTACATGAAGAATCGAGACTGAAGGTTGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAGGATCTCAACCCGAAGATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGATAATACTCACATTAGCACTAGAATTGCTGGGACCTACGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACAGACAAAGCAGATGTTTATAGTTTTGGAATTGTGGCGTTGGAAATCCTCAGTGGAAAGAGCAACACCATTTATCGGTCAAAGGAGGAAGCATTCTATCTTCTTGATTGGGCACATTTGTTGAAAGAGAAAGGTGACCTAATGGATCTAGTTGATAGAAGATTAGGTTCAGATTTCAACAAAAAGGAGGCTATGGTAGTGATCAATGTGGCTCTCCTATGCACCAACGTCACTTCAAACCTTAGGCCTGCTATGTCGTCGGTGGTAAGTATGCTTGATGGAAAGACTGTGGTTCCAGAATTTGTTTCAGATTCAAGTGAAGTAATGGATGAAAAGAAGTTGGAAGTAATGAGGCAGTATTACTATCAGATTGAAGAGAAAAACATAAGTAAGTCACAAACACAAAGTCAGAGTTTATCAATTGACAGGCCATGGACTGCTTCATCTTCATCAGCTGTAGACCTTTATCCTATCCGGAGTGATTCTTCCTATTGGGAGGAAAGAAATTAA 3024 0.3915 MRTSSQSLFLSLIVIWFISLTAFGATTIHPDEKKALEDIANSLGKKDWNFDIDPCSNNSNWATPTISNIVENNVTCNCSVAGDNFCHVVTITLKGQNLPGNLPPALSKLRHLQIIDLSRNYLNGTIPKEWGSMSNLLNITLPGNRLTGSIPKEIANISTLIQLELTANQMSGNLPPELGNLAQILTLRLSSNNFTGELPLTLAKLTTLRDLQISDNQFFGKIPDFIQNWTNIYSLIIQGSGLSGPIPSEISRLRNLTDLRISDLNGSEYASLPQLKNIPLLKTLILRNCNINGKLPDYLGNMTTLKHLDLSFNKLSGTIPISYAITSSVQYIFLTGNLLTGPIPPWKAKINVDLSYNNFSNDQVSQKCRNENVNLFSTSWTSNDIGTISCPGVQCDKPAYSLYINCGGMQATVNRKVYDSDSDSPGPARFHVGSTGNWAFSTTGIYMDSNQLRETYPPQNIATLTMVDSELYTNGRVSPISLTYYGFCLANGSYTVNLHFAEIMFTDDQTYASLGRRVFDIYLQGKPMQKEFNIAEEAGGVGKEIIKQFKDVAVTSSTLEIRLYWAGKGTQAVPNKSVYGPLISAISVESDSAPGSSISAGAVVGIVVAAISIMIIVFGILWWKGCFRKKNSLAREVMSLDLQTGLFTLRQIKAATNNFDINNKIGEGGFGPVYKGRLSNGTLIAVKQLSSKSKQGNREFLNEIGMISALQHPYLVKLYGCCVEGDQLLLVYEYLENNSLARALFGPEEHQIKLDWSTRQKICVGIARGLAYLHEESRLKVVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEILSGKSNTIYRSKEEAFYLLDWAHLLKEKGDLMDLVDRRLGSDFNKKEAMVVINVALLCTNVTSNLRPAMSSVVSMLDGKTVVPEFVSDSSEVMDEKKLEVMRQYYYQIEEKNISKSQTQSQSLSIDRPWTASSSSAVDLYPIRSDSSYWEERN 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01946 1007 CDD STKc_IRAK 665 932 - -
Car01g01946 1007 Gene3D Phosphorylase Kinase; domain 1 624 734 - -
Car01g01946 1007 Gene3D - 399 592 - -
Car01g01946 1007 Pfam Malectin domain 401 586 IPR021720 -
Car01g01946 1007 SUPERFAMILY Protein kinase-like (PK-like) 643 940 IPR011009 -
Car01g01946 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 392 980 - -
Car01g01946 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 76 291 - -
Car01g01946 1007 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 292 360 - -
Car01g01946 1007 Pfam Protein tyrosine and serine/threonine kinase 661 929 IPR001245 GO:0004672|GO:0006468
Car01g01946 1007 Gene3D Ribonuclease Inhibitor 269 383 IPR032675 -
Car01g01946 1007 Gene3D Ribonuclease Inhibitor 161 268 IPR032675 -
Car01g01946 1007 SUPERFAMILY L domain-like 50 370 - -
Car01g01946 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 392 980 - -
Car01g01946 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 76 291 - -
Car01g01946 1007 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 292 360 - -
Car01g01946 1007 Gene3D Ribonuclease Inhibitor 31 160 IPR032675 -
Car01g01946 1007 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Car01g01946 1007 Gene3D Transferase(Phosphotransferase) domain 1 735 945 - -
Car01g01946 1007 ProSiteProfiles Protein kinase domain profile. 659 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01946 1007 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01946 Car-Chr1 44165830 44178227 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01946 25 976 Receptor kinase-like Gene Family AT1G53420 54.819 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car01g01946 PK_Tyr_Ser-Thr 3.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01946 - - gmx:732563 1314.67