Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01934 ATGAATGTAGCTCAAGAAGATCTAAAGAAAGCAAAGGAACAAACTCTTCAGGCTGAGAAGGTAAAAGCTATTGATGAGTTGAAAGAAGCACATAGAGTGGCTGAGGAAGCAAATAAGAAACTCAGGGAAGCATTGGTGGCTCCAAAACTGGCTAAAGAGGAATCTGAGATTGAAAAGTTTTCATATCAAGGTGCAATCACAAAAAAAAAAAAAAAGACATCTATTAAAGAAGTGGCTGGAATGGATGTTCTTTGCAGTGATAAAACTGAAACTCTCACTTTGAATAAGCTAAGTGTTGATAGAAACTTGATTGAGATGTTTGCTAAGGGTGTAGATAAGGACTTTGTGATACTTTTAGCAACTAGAGCTTCTAGGATAGAAAATCAGGATGCTATTGATGTTGCAATTGTTGGAATGCTTTCGGACCCACAAGAGGCAAGAGTTGGTGTGAGGAAAAGGGTTCATGCGGCGATTGACAAGTTTGCACAGTGGGGACTTCGATCTTTTGGCGTTGCTTGTCATGAAGTACCTGAGAGAACAAAATATAGTCCTGGTTCACCATGTAAATTTGTTGGTCTATTACCACTATTTGATACTCCTAGGCATGATAGTGCAGAAACAATTCAAAGAGCTCTTGATTTTGGTGTCAATGTCAAGATGATTACTAGGGATGAACTTGCCATTGGTAAAGAAACAAGTAGAAGGCTTGGAATGGGAACAAACATGTATCCATCATCTGCTTTGCCTGGTCAAAACAAAGATGTTCCTACTTTAGATCTTCCTATTGACGAGCTGATTGAGATGGTCGATGGAGTTAAGAAGATTGCTAAGTGTAAAATTACTTAG 846 0.3853 MNVAQEDLKKAKEQTLQAEKVKAIDELKEAHRVAEEANKKLREALVAPKLAKEESEIEKFSYQGAITKKKKKTSIKEVAGMDVLCSDKTETLTLNKLSVDRNLIEMFAKGVDKDFVILLATRASRIENQDAIDVAIVGMLSDPQEARVGVRKRVHAAIDKFAQWGLRSFGVACHEVPERTKYSPGSPCKFVGLLPLFDTPRHDSAETIQRALDFGVNVKMITRDELAIGKETSRRLGMGTNMYPSSALPGQNKDVPTLDLPIDELIEMVDGVKKIAKCKIT 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01934 281 PRINTS P-type cation-transporting ATPase superfamily signature 85 99 - -
Car01g01934 281 PRINTS P-type cation-transporting ATPase superfamily signature 214 224 - -
Car01g01934 281 PRINTS P-type cation-transporting ATPase superfamily signature 192 203 - -
Car01g01934 281 PANTHER CALCIUM-TRANSPORTING ATPASE 150 273 - -
Car01g01934 281 PANTHER CALCIUM-TRANSPORTING ATPASE 59 151 - -
Car01g01934 281 Gene3D - 193 279 IPR023214 -
Car01g01934 281 SUPERFAMILY HAD-like 81 239 IPR036412 -
Car01g01934 281 Coils Coil 1 47 - -
Car01g01934 281 Gene3D - 97 150 IPR023299 GO:0000166
Car01g01934 281 Gene3D - 151 192 IPR023299 GO:0000166
Car01g01934 281 PANTHER PLASMA MEMBRANE ATPASE 59 151 - -
Car01g01934 281 PANTHER PLASMA MEMBRANE ATPASE 150 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01934 Car-Chr1 43976700 43978066 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01934 58 275 Primary Pumps ATPases AT5G62670 58.113 9.46e-92 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01934 K01535 - gmx:100794372 282.722