Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01925 atgcagaaagatcaactcaagaagGATATTAAAGAGGTTAAATTTTTCACCGAGTACGGGGATGCCAACAGATACAAAATTCTGGAAGTTATTGGGAAGGGTAGTTACGGAGTTGTTTGCGCAGCAATAGACACACACACTGGGGGAAAAGTTGCAATCAAGAAGATTCACGATGTTTTTGAACATATCTCTGACGCAATTAGAATCCTCAGGGAAGTCAAGTTACTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATTATGTTGCCGCCTTCAAAGAGGGAATTTAAAGATATTTATGTAGTATTTGAGCTCATGGAGTCCGATCTCCATCAAGTCATCAAAGCCAATGATGACTTGACCCGTGAACATCAACAGTTTTTTCTTTATCAGATGCTTCGTGCGTTGAAGTTTATGCATACAGCAAATGTATATCATAGAGACCTTAAGCCGAAGAATATACTGGCAAATGCGAACTGCAAACTCAAAGTCTGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATACCCCGACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTATAGAGCCCCTGAACTATGCGGCTCTTTCTTTTCTAAGTACACACCAGCGATTGATATATGGAGCATTGGATGCATTTTCGCCGAAGTTCTTACAGGAAAACCATTGTTTCCTGGTAAAAGTGTGGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCCGAAATTATTGCAGGAGTTCGAAATGAGAAGGCAAGGAAGTACTTGATGGAGATGAGGAAGAAATTTCCTGTGCCATTTGAACGGAAATTTCCAAATGCAGATCCATCAGCACTTCGCTTATTGCAACGGCTTTTAGCATTCGATCCAAAGGAGCGACCGACAGCTCAAGAGGCACTAGCTGATCCTTTCTTCAAGGGTTTGGCAAAAGTTGAGAGGGAACCTTCTTCTCAGCCAATTTCAAAAATGGAATTTGAGTTCGAGAGGAGGAGGGTGACAAAAGACGATATTAAAGAACTAATATATCGGGAAATACTGGAGTATCATCCTCAGCTGCTTAAGGATTACATAAATGGAACTGAAGGCACAAACTTTCTGTACCCTAGTGCAATAGACCAATTCAGAAAGCAGTTTGCTTATCTTGAAGAGAATAATAGTAAATGTGGACCTGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACGGTTCTCTCAAGCACAATTCCTCCCAGTATGCAGCCATCTTTTGCTCCATATGGAAACAAGCAAATCGCACAACAGGCATTCAAGATTTCAAGAGCAATAGAATCCAATTCTGTAAGCCAATCAAAGGGTTCACGACCTCCTCCAAGAGCGCCGCCAGCCAAACCAGGTAGAGTTATAGGGCCAGTTCACAACGACAATGGGAGAAGCACTAAAGATAATTATGACCTAAGGATCTTCTACCAAAATAATATTCCTCAAACAATTTCTCCACACTGTTTCCAAAGGGCGCATGCACCCCCCAGTAACGCAAAAACTACACCAGAAACATACAAGGATAACTCACAAGGCAAACATCAACCCTCACCCGAACTGTGTAGCGTGCCAGCCAGACCAGCTATCGATCTTAATACCAATCCATACTACCAGCAGGGCAAGAACGATCTCTTAAACGATCCTGTCACCATTATTGATGCGGAATTGATGCGGGCACAATCTCAATTTGGGgcagctggtgctgctgcagtagctgttgctgctCACAGGCATTCTGCAGGCTTTCAATATGGATTGTCATAG 1824 0.409 MQKDQLKKDIKEVKFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGGKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHQQFFLYQMLRALKFMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDTPTTTFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPEIIAGVRNEKARKYLMEMRKKFPVPFERKFPNADPSALRLLQRLLAFDPKERPTAQEALADPFFKGLAKVEREPSSQPISKMEFEFERRRVTKDDIKELIYREILEYHPQLLKDYINGTEGTNFLYPSAIDQFRKQFAYLEENNSKCGPVIPPERKHVSLPRSTVLSSTIPPSMQPSFAPYGNKQIAQQAFKISRAIESNSVSQSKGSRPPPRAPPAKPGRVIGPVHNDNGRSTKDNYDLRIFYQNNIPQTISPHCFQRAHAPPSNAKTTPETYKDNSQGKHQPSPELCSVPARPAIDLNTNPYYQQGKNDLLNDPVTIIDAELMRAQSQFGAAGAAAVAVAAHRHSAGFQYGLS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01925 607 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car01g01925 607 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01925 607 MobiDBLite consensus disorder prediction 515 537 - -
Car01g01925 607 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Car01g01925 607 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Car01g01925 607 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01925 607 MobiDBLite consensus disorder prediction 450 486 - -
Car01g01925 607 SUPERFAMILY Protein kinase-like (PK-like) 20 320 IPR011009 -
Car01g01925 607 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01925 607 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Car01g01925 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 482 - -
Car01g01925 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 482 - -
Car01g01925 607 CDD STKc_TDY_MAPK 24 361 - -
Car01g01925 607 MobiDBLite consensus disorder prediction 510 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01925 Car-Chr1 43810453 43815082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01925 1 605 MAP Kinase Gene Family AT1G53510 69.839 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Car01g01925 Pkinase 3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01925 - K04371 gmx:100800878 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01925 01 43810453 43815082 Car01g01925 01 43810453 43815082 ECH