Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01912 ATGAGAAATTCCCTGGTTATCGCCTTTTCCATAACCACATGCTTCATTGCTTTTGTGATATCAAAGATTTTCATCTCAATCCTACTCTACAAAAGATGGAGAAGAAAGCATGCGATTCATGAAGAAGGTTATACAGGAGGAAAGATGGTGATATTTAGGTCTTCAATCCTTAAATCTTTAACATCTGATATGCTGTTAAAGAAGACACAGAAACTGAACAACAAGGACATCATCGGTTCCGGTGGTTATGGTGTAGTTTATGAACTAAAACTCAATGATTCCGCGGCCTTCGCTGTGAAAAGGCTGAACCGTGGAACCGCAGAGAGAGACAATGGTTTTGAGAGAGAGTTAGAGGCAATGGCAGACATAAAACATAGAAACATTGTGACCCTTCATGGATATTACACTGCACCACACTACAATCTTCTCATATATGAGTTGATGCCTAATGGAAGTTTGGATACCCTTTTGCATGGAAGATCAATGAACAAGAAGGTTTTGGACTGGCCGACAAGACACAGAATAGCTGTAGGTGCAGCTAGAGGAATATCATATCTTCACCATGATTGTATCCCTCACATTATCCACAGAGATATAAAATCAAGTAACATATTGTTGGATCAAAATATGGAAGCACGGGTTTCGGATTTCGGATTAGCCACATTGATGGAACCAAACAAAACTCATGTTTCAACCATTGTTGCTGGAACTTTTGGATACTTGGCTCCTGAATATTTTGATACAGGAAGAGCAACAGTGAAAGGGGATGTTTACAGTTTTGGAGTTGTGTTACTGGAGCTTTTAACAGGAAAGAAACCTAGTGATGAAACATTTATGGAAGAGGGAACCAAGCTTGTCACATGGGTGAAAGCTGTTGTTCGAGAGAATAAGGAGGACTTTGTTCTTGATAGTAGATTAGAGTCATGTCCAATGCAAGAGGTCAACAAGGTGTTCAACATTGCAATGATGTGTCTTGAGCTAGATCCTTTGAAGAGACCAACCATGGCTGAGGTTGTCAACTTGCTTGAGAAAACACAAACAGATAAACTTGTTATTGTTACATCATCCTGA 1071 0.3959 MRNSLVIAFSITTCFIAFVISKIFISILLYKRWRRKHAIHEEGYTGGKMVIFRSSILKSLTSDMLLKKTQKLNNKDIIGSGGYGVVYELKLNDSAAFAVKRLNRGTAERDNGFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELMPNGSLDTLLHGRSMNKKVLDWPTRHRIAVGAARGISYLHHDCIPHIIHRDIKSSNILLDQNMEARVSDFGLATLMEPNKTHVSTIVAGTFGYLAPEYFDTGRATVKGDVYSFGVVLLELLTGKKPSDETFMEEGTKLVTWVKAVVRENKEDFVLDSRLESCPMQEVNKVFNIAMMCLELDPLKRPTMAEVVNLLEKTQTDKLVIVTSS 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01912 356 Gene3D Phosphorylase Kinase; domain 1 35 147 - -
Car01g01912 356 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01912 356 Gene3D Transferase(Phosphotransferase) domain 1 148 354 - -
Car01g01912 356 Pfam Protein kinase domain 74 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01912 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Car01g01912 356 ProSiteProfiles Protein kinase domain profile. 72 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01912 356 SUPERFAMILY Protein kinase-like (PK-like) 52 344 IPR011009 -
Car01g01912 356 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 347 - -
Car01g01912 356 PANTHER BNAA07G39120D PROTEIN 1 347 - -
Car01g01912 356 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01912 Car-Chr1 43630632 43634908 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01912 5 343 Receptor kinase-like Gene Family AT2G35620 46.784 5.50e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Car01g01912 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01912 - - ahf:112703495 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01912 01 43630632 43634908 Car01g01912 01 43630632 43634908 ECH