Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01866 ATGGCATCCAATTTCCAAACCTTCAACTTTGAAACTCAAATTCCACAAGAGCTTCTAATATCACAAATCATGCAAATTCATGCAACAATTTCAAAGCTAGAATCTCTTAGGCCTTCAAAACAAGTCAACACCCTTTTGAATCACTTAGTCAAACTTTGCATCCTCCCTTCATCCATTGACATTGAATCCTTACCACAAGAAGTTAAAACAATGCGTGAAAGTCTCATTCCCCTATGTGGCAAAGCTGAAGAACTTTTAGAGCTTGAATTCTCAACTTTCATTAGCCTTACACCAAATCCAATAAAAAATTTAACTATTTTTCCATATTATGGAAACTATGTTAAATTAGCAAACTATGAAACCAAAATCCTCAAAGAAAATGGTGTTATGCATGCAAAAAAAGTAGCTTTTATAGGATCTGGCCCAATGCCATTAAGTTCAATTATAATGGCAATGCATCACATGGAATCAACACACTTTGATAATTTTGATATTGATGAGAAGGCTAATGAGGTTGCTAGCAAGATCGTGGCATCGGATAAATCGCTCGAAAAGAGGATGAAGTTTGTGACACAAGATATTATGGAAGTGAAGGAGAAATTGGGACAATATGATTGCATTTTTTTGGCTGCACTTGTTGGTATGAGTAGAGGTGAAAAAGTTAAGATTTTGGGACATATAAGAAAGTATATGAAAGAAGGTAGTGTTTTGGTTGTGAGAAGTGCAAAAGGGAGTAGAGCTTTTTTGTATCCTATTGTTGAGGAGAATGATATGGTTGATTTTGAGGTTCTTACTATTTTCCATCCAATGGATGATGTTATCAACTCGGTTATTCTTCTTCGTAAGCCTAAAGCTTGA 858 0.3508 MASNFQTFNFETQIPQELLISQIMQIHATISKLESLRPSKQVNTLLNHLVKLCILPSSIDIESLPQEVKTMRESLIPLCGKAEELLELEFSTFISLTPNPIKNLTIFPYYGNYVKLANYETKILKENGVMHAKKVAFIGSGPMPLSSIIMAMHHMESTHFDNFDIDEKANEVASKIVASDKSLEKRMKFVTQDIMEVKEKLGQYDCIFLAALVGMSRGEKVKILGHIRKYMKEGSVLVVRSAKGSRAFLYPIVEENDMVDFEVLTIFHPMDDVINSVILLRKPKA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01866 285 CDD AdoMet_MTases 163 239 - -
Car01g01866 285 Pfam Nicotianamine synthase protein 16 284 IPR004298 GO:0030410|GO:0030418
Car01g01866 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 242 IPR029063 -
Car01g01866 285 PANTHER NICOTIANAMINE SYNTHASE 3 1 284 IPR004298 GO:0030410|GO:0030418
Car01g01866 285 Gene3D Vaccinia Virus protein VP39 18 284 IPR029063 -
Car01g01866 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 11 285 IPR004298 GO:0030410|GO:0030418
Car01g01866 285 PANTHER NICOTIANAMINE SYNTHASE 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01866 Car-Chr1 42802205 42803409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car01g01866 16 282 Nicotianamine Synthase Gene Family AT5G56080 51.481 1.95e-91 272